RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
CSHL1-208ENST00000558609 CENPFP49454 3210 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 GDF11O95390 407 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 BACE1P56817 501 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 UBE3CQ15386 1083 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 SHROOM1Q2M3G4 852 aaPredicted RBP18.73■□□□□ 0.59
CSHL1-208ENST00000558609 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
CSHL1-208ENST00000558609 LCORLQ8N3X6 602 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 PNMA3Q9UL41 463 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 LOC285556D6RIA3 1793 aa18.73■□□□□ 0.59
CSHL1-208ENST00000558609 BRCA2P51587 3418 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 ZSWIM8A7E2V4 1837 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 C19orf81C9J6K1 198 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
CSHL1-208ENST00000558609 HOXD10P28358 340 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 PLCD1P51178 756 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 PABPC4Q13310 644 aaKnown RBP eCLIP18.72■□□□□ 0.59
CSHL1-208ENST00000558609 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 SMCR8Q8TEV9 937 aaPredicted RBP18.72■□□□□ 0.59
CSHL1-208ENST00000558609 GPATCH3Q96I76 525 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 ARMT1Q9H993 441 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 DCP1AQ9NPI6 582 aaPredicted RBP18.72■□□□□ 0.59
CSHL1-208ENST00000558609 SRRDQ9UH36 339 aa18.72■□□□□ 0.59
CSHL1-208ENST00000558609 FMNL1O95466 1100 aaPredicted RBP18.71■□□□□ 0.59
CSHL1-208ENST00000558609 GH2P01242 217 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 GABPAQ06546 454 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 MTMR2Q13614 643 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 SLFNL1Q499Z3 407 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 ZSCAN25Q6NSZ9 544 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 SDR42E1Q8WUS8 393 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 GCC1Q96CN9 775 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 ATP8A2Q9NTI2 1148 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 MCM9Q9NXL9 1143 aa18.71■□□□□ 0.59
CSHL1-208ENST00000558609 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
CSHL1-208ENST00000558609 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 MBD4O95243 580 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 OSBPP22059 807 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 FCGRTP55899 365 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
CSHL1-208ENST00000558609 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 TMOD4Q9NZQ9 345 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 TAOK2Q9UL54 1235 aa18.7■□□□□ 0.58
CSHL1-208ENST00000558609 NAV1Q8NEY1 1877 aa18.69■□□□□ 0.58
CSHL1-208ENST00000558609 KIAA0100Q14667 2235 aaKnown RBP18.69■□□□□ 0.58
CSHL1-208ENST00000558609 MYH7P12883 1935 aa18.69■□□□□ 0.58
CSHL1-208ENST00000558609 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
CSHL1-208ENST00000558609 CHGBP05060 677 aa18.69■□□□□ 0.58
CSHL1-208ENST00000558609 HOXA7P31268 230 aaPredicted RBP18.69■□□□□ 0.58
CSHL1-208ENST00000558609 SHMT1P34896 483 aa18.69■□□□□ 0.58
CSHL1-208ENST00000558609 GCLCP48506 637 aaPredicted RBP18.69■□□□□ 0.58
CSHL1-208ENST00000558609 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
CSHL1-208ENST00000558609 PRKAB2O43741 272 aa18.68■□□□□ 0.58
CSHL1-208ENST00000558609 FAM110CQ1W6H9 321 aa18.68■□□□□ 0.58
CSHL1-208ENST00000558609 ABCB5Q2M3G0 1257 aa18.68■□□□□ 0.58
CSHL1-208ENST00000558609 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
CSHL1-208ENST00000558609 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
CSHL1-208ENST00000558609 TTC41PQ6P2S7 1318 aa18.68■□□□□ 0.58
CSHL1-208ENST00000558609 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
CSHL1-208ENST00000558609 EVX2Q03828 476 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 AAMPQ13685 434 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 USP17L2Q6R6M4 530 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
CSHL1-208ENST00000558609 CABP5Q9NP86 173 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 EMILIN3Q9NT22 766 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 MGAMO43451 1857 aa18.67■□□□□ 0.58
CSHL1-208ENST00000558609 CYP2D6P10635 497 aa18.66■□□□□ 0.58
CSHL1-208ENST00000558609 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
CSHL1-208ENST00000558609 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
CSHL1-208ENST00000558609 RAET1EQ8TD07 263 aa18.66■□□□□ 0.58
CSHL1-208ENST00000558609 SH3TC2Q8TF17 1288 aa18.66■□□□□ 0.58
CSHL1-208ENST00000558609 TMEM106CQ9BVX2 250 aa18.66■□□□□ 0.58
CSHL1-208ENST00000558609 SWAP70Q9UH65 585 aa18.66■□□□□ 0.58
CSHL1-208ENST00000558609 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
CSHL1-208ENST00000558609 ERC2O15083 957 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 GUCY1A2P33402 732 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 IRX3P78415 501 aaPredicted RBP18.65■□□□□ 0.58
CSHL1-208ENST00000558609 PRKCZQ05513 592 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 C12orf60Q5U649 245 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 C12orf42Q96LP6 360 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 P2RX7Q99572 595 aaKnown RBP18.65■□□□□ 0.58
CSHL1-208ENST00000558609 KIAA1683Q9H0B3 1180 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 MORF4L1Q9UBU8 362 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 SLC4A4Q9Y6R1 1079 aa18.65■□□□□ 0.58
CSHL1-208ENST00000558609 TNPO2O14787 897 aaKnown RBP18.64■□□□□ 0.57
CSHL1-208ENST00000558609 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
CSHL1-208ENST00000558609 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.57
CSHL1-208ENST00000558609 ZFYP08048 801 aaPredicted RBP18.64■□□□□ 0.57
CSHL1-208ENST00000558609 GRK4P32298 578 aa18.64■□□□□ 0.57
CSHL1-208ENST00000558609 USP14P54578 494 aa18.64■□□□□ 0.57
CSHL1-208ENST00000558609 PI4K2BQ8TCG2 481 aa18.64■□□□□ 0.57
CSHL1-208ENST00000558609 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.57
CSHL1-208ENST00000558609 APPBP2Q92624 585 aa18.64■□□□□ 0.57
CSHL1-208ENST00000558609 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
CSHL1-208ENST00000558609 STRBPQ96SI9 672 aaKnown RBP18.64■□□□□ 0.57
CSHL1-208ENST00000558609 GABRQQ9UN88 632 aa18.64■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L12C9JPN9 530 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms