RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 OSBPL7Q9BZF2 842 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 BHLHE41Q9C0J9 482 aaPredicted RBP5.89□□□□□ -1.47
SPG11-211ENST00000558561 ADAM19Q9H013 955 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 USP19O94966 1318 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 SPATA31A5Q5VU36 1347 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 SPATA31A7Q8IWB4 1347 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 CLSPNQ9HAW4 1339 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 A0A1W2PP64 1363 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 PHRF1Q9P1Y6 1649 aaKnown RBP5.88□□□□□ -1.47
SPG11-211ENST00000558561 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 LINC01387J3KSC0 135 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 EPHA1P21709 976 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 TMF1P82094 1093 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 CNGB1Q14028 1251 aaPredicted RBP5.88□□□□□ -1.47
SPG11-211ENST00000558561 RRS1Q15050 365 aaKnown RBP5.88□□□□□ -1.47
SPG11-211ENST00000558561 TXNDC11Q6PKC3 985 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 GLIS3Q8NEA6 775 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 BSNDQ8WZ55 320 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 LTV1Q96GA3 475 aaPredicted RBP5.88□□□□□ -1.47
SPG11-211ENST00000558561 FAM161BQ96MY7 647 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 MUC3BQ9H195 1237 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 PARP2Q9UGN5 583 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 PPME1Q9Y570 386 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 SPATA31A1Q5TZJ5 1347 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 EIF3AQ14152 1382 aaKnown RBP5.88□□□□□ -1.47
SPG11-211ENST00000558561 NRAPQ86VF7 1730 aa5.88□□□□□ -1.47
SPG11-211ENST00000558561 A0A096LPE4 126 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 A0A1W2PPZ6 126 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 COL8A1P27658 744 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 HDGFL2Q7Z4V5 671 aaPredicted RBP5.87□□□□□ -1.47
SPG11-211ENST00000558561 VN1R5Q7Z5H4 357 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 PUS7Q96PZ0 661 aaKnown RBP5.87□□□□□ -1.47
SPG11-211ENST00000558561 PANK3Q9H999 370 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 ABCB6Q9NP58 842 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 SOX13Q9UN79 622 aa5.87□□□□□ -1.47
SPG11-211ENST00000558561 RGPD2P0DJD1 1756 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 COL14A1Q05707 1796 aaKnown RBP5.86□□□□□ -1.47
SPG11-211ENST00000558561 MON2Q7Z3U7 1717 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 NRKQ7Z2Y5 1582 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 A0A0A0MRY4 1105 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
SPG11-211ENST00000558561 GNA15P30679 374 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 TNNT2P45379 298 aaPredicted RBP5.86□□□□□ -1.47
SPG11-211ENST00000558561 FCGRTP55899 365 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 HGSNATQ68CP4 663 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 PRPF40BQ6NWY9 871 aaKnown RBP5.86□□□□□ -1.47
SPG11-211ENST00000558561 KRT27Q7Z3Y8 459 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 CACTIN-AS1Q8N1I8 211 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 PPP4R2Q9NY27 417 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 TERF2IPQ9NYB0 399 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 KAT6BQ8WYB5 2073 aa5.86□□□□□ -1.47
SPG11-211ENST00000558561 LMO7Q8WWI1 1683 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 SLIT3O75094 1523 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 CPDO75976 1380 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 USP31Q70CQ4 1352 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 MAP3K19Q56UN5 1328 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 TTC21AQ8NDW8 1320 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 PIK3R2O00459 728 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 SOX1O00570 391 aaPredicted RBP5.85□□□□□ -1.47
SPG11-211ENST00000558561 ZNF16P17020 682 aaPredicted RBP5.85□□□□□ -1.47
SPG11-211ENST00000558561 TRIM28Q13263 835 aaKnown RBP5.85□□□□□ -1.47
SPG11-211ENST00000558561 SETDB1Q15047 1291 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 ZNF423Q2M1K9 1284 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 HSP90AB2PQ58FF8 381 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 TOM1L2Q6ZVM7 507 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 USHBP1Q8N6Y0 703 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 MARCH10Q8NA82 808 aaPredicted RBP5.85□□□□□ -1.47
SPG11-211ENST00000558561 CARD10Q9BWT7 1032 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 SPG7Q9UQ90 795 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.85□□□□□ -1.47
SPG11-211ENST00000558561 NWD2Q9ULI1 1742 aa5.85□□□□□ -1.47
SPG11-211ENST00000558561 NFAT5O94916 1531 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 AATKQ6ZMQ8 1374 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 KIF7Q2M1P5 1343 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 FAM177BA6PVY3 158 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 H3BRJ5 948 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 GIPC1O14908 333 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 FSCN2O14926 492 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 TRIM37O94972 964 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 ITPKAP23677 461 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 CABP4P57796 275 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 RAC1P63000 192 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 DAB2P98082 770 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 FGD1P98174 961 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 PSMD2Q13200 908 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 NBPF6Q5VWK0 638 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 FMR1NBQ8N0W7 255 aaPredicted RBP5.84□□□□□ -1.47
SPG11-211ENST00000558561 TCP11L2Q8N4U5 519 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 GALNT11Q8NCW6 608 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 ANKRD24Q8TF21 1146 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 SLC7A3Q8WY07 619 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 IP6K1Q92551 441 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 NBPF4Q96M43 638 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 C12orf49Q9H741 205 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 NOP53Q9NZM5 478 aaKnown RBP5.84□□□□□ -1.47
SPG11-211ENST00000558561 AKAP2Q9Y2D5 859 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 AK5Q9Y6K8 562 aa5.84□□□□□ -1.47
SPG11-211ENST00000558561 COL5A2P05997 1499 aaPredicted RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 CDK12Q9NYV4 1490 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms