RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 C19orf81C9J6K1 198 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 BTBD19C9JJ37 291 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 TAF1CQ15572 869 aaPredicted RBP10.18□□□□□ -0.78
TPM1-213ENST00000558400 CERKLQ49MI3 558 aaPredicted RBP10.18□□□□□ -0.78
TPM1-213ENST00000558400 TSHZ3Q63HK5 1081 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 TATDN1Q6P1N9 297 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 LCORLQ8N3X6 602 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 OTUD7AQ8TE49 926 aaPredicted RBP10.18□□□□□ -0.78
TPM1-213ENST00000558400 STRBPQ96SI9 672 aaKnown RBP10.18□□□□□ -0.78
TPM1-213ENST00000558400 FSD1Q9BTV5 496 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 WDR18Q9BV38 432 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 PUS7LQ9H0K6 701 aaKnown RBP10.18□□□□□ -0.78
TPM1-213ENST00000558400 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 SWAP70Q9UH65 585 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 SLC45A1Q9Y2W3 748 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 SLC4A4Q9Y6R1 1079 aa10.18□□□□□ -0.78
TPM1-213ENST00000558400 A0A0G2JLL6 359 aaPredicted RBP10.17□□□□□ -0.78
TPM1-213ENST00000558400 FAM196BA6NMK8 535 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 PATL2C9JE40 543 aaKnown RBP10.17□□□□□ -0.78
TPM1-213ENST00000558400 TLR2O60603 784 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 PLCD1P51178 756 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 SP3Q02447 781 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 SPP2Q13103 211 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.78
TPM1-213ENST00000558400 CRHR2Q13324 411 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 PRRT2Q7Z6L0 340 aaPredicted RBP10.17□□□□□ -0.78
TPM1-213ENST00000558400 FAM43AQ8N2R8 423 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
TPM1-213ENST00000558400 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 ZNF296Q8WUU4 475 aaPredicted RBP10.17□□□□□ -0.78
TPM1-213ENST00000558400 OSBP2Q969R2 916 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 CCDC17Q96LX7 622 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 NACAP1Q9BZK3 213 aa10.17□□□□□ -0.78
TPM1-213ENST00000558400 TRIM75PA6NK02 468 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 USP17L12C9JPN9 530 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 USP17L21D6R901 530 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 PDHXO00330 501 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 PRKAB2O43741 272 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 BACE1P56817 501 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 IRX6P78412 446 aaPredicted RBP10.16□□□□□ -0.78
TPM1-213ENST00000558400 GABPAQ06546 454 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 ABCB5Q2M3G0 1257 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 SH3D19Q5HYK7 790 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 ZMYM1Q5SVZ6 1142 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 C12orf60Q5U649 245 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 PLEKHM2Q8IWE5 1019 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 DNAJC18Q9H819 358 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 ZNF287Q9HBT7 754 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
TPM1-213ENST00000558400 KIAA0100Q14667 2235 aaKnown RBP10.15□□□□□ -0.78
TPM1-213ENST00000558400 TRIOBPQ9H2D6 2365 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 GSG1L2A8MUP6 293 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 USP17L10C9JJH3 530 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 GPAA1O43292 621 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 APPP05067 770 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 USP14P54578 494 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 RRP1BQ14684 758 aaKnown RBP10.15□□□□□ -0.78
TPM1-213ENST00000558400 KIF22Q14807 665 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 CTR9Q6PD62 1173 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 GADL1Q6ZQY3 521 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 PARK7Q99497 189 aaKnown RBP10.15□□□□□ -0.78
TPM1-213ENST00000558400 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 TMOD4Q9NZQ9 345 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
TPM1-213ENST00000558400 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 ZBTB21Q9ULJ3 1066 aa10.15□□□□□ -0.78
TPM1-213ENST00000558400 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.79
TPM1-213ENST00000558400 MAST2Q6P0Q8 1798 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 HIP1O00291 1037 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 DLL1O00548 723 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 GNRH1P01148 92 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 GH2P01242 217 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 SLC3A2P08195 630 aaKnown RBP10.14□□□□□ -0.79
TPM1-213ENST00000558400 OSBPP22059 807 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 SHMT1P34896 483 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 MFAP1P55081 439 aaKnown RBP10.14□□□□□ -0.79
TPM1-213ENST00000558400 MOGSQ13724 837 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 SLC4A8Q2Y0W8 1093 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 GPAT2Q6NUI2 795 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 AGTPBP1Q9UPW5 1226 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 DOCK2Q92608 1830 aa10.14□□□□□ -0.79
TPM1-213ENST00000558400 MYO5AQ9Y4I1 1855 aaKnown RBP10.13□□□□□ -0.79
TPM1-213ENST00000558400 GDF11O95390 407 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 CHGBP05060 677 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 HOXD10P28358 340 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 HOXA7P31268 230 aaPredicted RBP10.13□□□□□ -0.79
TPM1-213ENST00000558400 GCLCP48506 637 aaPredicted RBP10.13□□□□□ -0.79
TPM1-213ENST00000558400 TDO2P48775 406 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 CDK8P49336 464 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 RAB3GAP1Q15042 981 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 MCMDC2Q4G0Z9 681 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 USP17L2Q6R6M4 530 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 C17orf99Q6UX52 265 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 TMEM179Q6ZVK1 233 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms