RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 LOC285556D6RIA3 1793 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 TCRBV5S4A2TA0A5A2 114 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 GH2P01242 217 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 CHGBP05060 677 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
HERC1-202ENST00000558324 HOXD10P28358 340 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 PRMT2P55345 433 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 EVX2Q03828 476 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 PRKCZQ05513 592 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 TTC6Q86TZ1 520 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 SDR42E1Q8WUS8 393 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 HAUS7Q99871 368 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 ARMT1Q9H993 441 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 TMOD4Q9NZQ9 345 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 NAV1Q8NEY1 1877 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 MYH1P12882 1939 aa14.43□□□□□ -0.1
HERC1-202ENST00000558324 DDX60LQ5H9U9 1706 aaKnown RBP14.42□□□□□ -0.1
HERC1-202ENST00000558324 TNPO2O14787 897 aaKnown RBP14.42□□□□□ -0.1
HERC1-202ENST00000558324 MBD4O95243 580 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 EN2P19622 333 aaPredicted RBP14.42□□□□□ -0.1
HERC1-202ENST00000558324 ADD2P35612 726 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 PLCD1P51178 756 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
HERC1-202ENST00000558324 BACE1P56817 501 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 PABPC4Q13310 644 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERC1-202ENST00000558324 ZYXQ15942 572 aaKnown RBP14.42□□□□□ -0.1
HERC1-202ENST00000558324 TSHZ3Q63HK5 1081 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 WDR18Q9BV38 432 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.42□□□□□ -0.14e-9■■■■□ 26.4
HERC1-202ENST00000558324 ASCC2Q9H1I8 757 aaPredicted RBP14.42□□□□□ -0.1
HERC1-202ENST00000558324 EHD4Q9H223 541 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 MCM9Q9NXL9 1143 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 GABRQQ9UN88 632 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 CENPFP49454 3210 aa14.42□□□□□ -0.1
HERC1-202ENST00000558324 USP17L10C9JJH3 530 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 CYP2D6P10635 497 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 IRX3P78415 501 aaPredicted RBP14.41□□□□□ -0.1
HERC1-202ENST00000558324 RAB3GAP1Q15042 981 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 SH3D19Q5HYK7 790 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 TATDN1Q6P1N9 297 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 FEZ1Q99689 392 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 ECHDC1Q9NTX5 307 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 BIN2Q9UBW5 565 aaPredicted RBP14.41□□□□□ -0.1
HERC1-202ENST00000558324 TAOK2Q9UL54 1235 aa14.41□□□□□ -0.1
HERC1-202ENST00000558324 PRKAB2O43741 272 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 GRK4P32298 578 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 SHMT1P34896 483 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 ABCB5Q2M3G0 1257 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 CERKLQ49MI3 558 aaPredicted RBP14.4□□□□□ -0.1
HERC1-202ENST00000558324 DCTPP1Q9H773 170 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 DCP1AQ9NPI6 582 aaPredicted RBP14.4□□□□□ -0.1
HERC1-202ENST00000558324 GINM1Q9NU53 330 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 PCDHB15Q9Y5E8 787 aa14.4□□□□□ -0.1
HERC1-202ENST00000558324 TNRC18O15417 2968 aaPredicted RBP14.4□□□□□ -0.1
HERC1-202ENST00000558324 RBBP6Q7Z6E9 1792 aaKnown RBP14.39□□□□□ -0.11
HERC1-202ENST00000558324 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
HERC1-202ENST00000558324 PEX10O60683 326 aa14.39□□□□□ -0.11
HERC1-202ENST00000558324 GCLCP48506 637 aaPredicted RBP14.39□□□□□ -0.11
HERC1-202ENST00000558324 FLT3LGP49771 235 aa14.39□□□□□ -0.11
HERC1-202ENST00000558324 MTFR1Q15390 333 aa14.39□□□□□ -0.11
HERC1-202ENST00000558324 FAM110CQ1W6H9 321 aa14.39□□□□□ -0.11
HERC1-202ENST00000558324 GPATCH3Q96I76 525 aa14.39□□□□□ -0.11
HERC1-202ENST00000558324 MGAMO43451 1857 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 BRCA2P51587 3418 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
HERC1-202ENST00000558324 ELNP15502 786 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 SLC44A5Q8NCS7 719 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 CRBNQ96SW2 442 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 CABP5Q9NP86 173 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
HERC1-202ENST00000558324 CYP2D7A0A087X1C5 515 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 ADCY3O60266 1144 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 GABPAQ06546 454 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 SEPT2Q15019 361 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 UBE3CQ15386 1083 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 ZSCAN25Q6NSZ9 544 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 USP17L2Q6R6M4 530 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 SLAIN1Q8ND83 568 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 ACER1Q8TDN7 264 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 COA7Q96BR5 231 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
HERC1-202ENST00000558324 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
HERC1-202ENST00000558324 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 CCL5P13501 91 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 HOXA7P31268 230 aaPredicted RBP14.36□□□□□ -0.11
HERC1-202ENST00000558324 HERVK_113P62684 666 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 PAGR1Q9BTK6 254 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 PUS7LQ9H0K6 701 aaKnown RBP14.36□□□□□ -0.11
HERC1-202ENST00000558324 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 ATP8A2Q9NTI2 1148 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
HERC1-202ENST00000558324 GUCY1A2P33402 732 aa14.35□□□□□ -0.11
HERC1-202ENST00000558324 UBXN2AP68543 259 aa14.35□□□□□ -0.11
HERC1-202ENST00000558324 PRPF38BQ5VTL8 546 aaKnown RBP14.35□□□□□ -0.11
HERC1-202ENST00000558324 AMOTL1Q8IY63 956 aa14.35□□□□□ -0.11
HERC1-202ENST00000558324 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
HERC1-202ENST00000558324 DDRGK1Q96HY6 314 aa14.35□□□□□ -0.11
HERC1-202ENST00000558324 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
HERC1-202ENST00000558324 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms