RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MTX1Q13505 466 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 TRPC3Q13507 836 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 MAGED2Q9UNF1 606 aaPredicted RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 ELP1O95163 1332 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 ASIC2Q16515 512 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 CAPN12Q6ZSI9 719 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 ZNF365Q70YC5 407 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 NSMFQ6X4W1 530 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 COX16Q9P0S2 106 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 CFBP00751 764 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 AKAP4Q5JQC9 854 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.5■□□□□ 0.07
SPG11-210ENST00000558319 CADPS2Q86UW7 1296 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 TTF2Q9UNY4 1162 aaKnown RBP15.5■□□□□ 0.07
SPG11-210ENST00000558319 MKRN3Q13064 507 aaKnown RBP15.5■□□□□ 0.07
SPG11-210ENST00000558319 NBPF14Q5TI25 921 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 TGFBRAP1Q8WUH2 860 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 XAB2Q9HCS7 855 aaKnown RBP15.5■□□□□ 0.07
SPG11-210ENST00000558319 KRT15P19012 456 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 SV2BQ7L1I2 683 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 KCNJ14Q9UNX9 436 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 RTL9Q8NET4 1388 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 A1BGP04217 495 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 CALML3P27482 149 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 SLF1Q9BQI6 1058 aa15.5■□□□□ 0.07
SPG11-210ENST00000558319 ARHGAP42A6NI28 874 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 LCA5Q86VQ0 697 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 POLKQ9UBT6 870 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 AFG3L2Q9Y4W6 797 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 RUFY4Q6ZNE9 571 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 CLTAP09496 248 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
SPG11-210ENST00000558319 TMTC2Q8N394 836 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 TRIM4Q9C037 500 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 SPECC1L-ADORA2AF8WAN1 911 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 MX2P20592 715 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 RBM28Q9NW13 759 aaKnown RBP15.49■□□□□ 0.07
SPG11-210ENST00000558319 TIAM1Q13009 1591 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 PFDN1O60925 122 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 RLBP1P12271 317 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 ARHGAP24Q8N264 748 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 LARGE2Q8N3Y3 721 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 FAM227BQ96M60 508 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 NOX5Q96PH1 765 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 NPHP3Q7Z494 1330 aa15.49■□□□□ 0.07
SPG11-210ENST00000558319 POLR2DO15514 142 aaKnown RBP15.48■□□□□ 0.07
SPG11-210ENST00000558319 TBC1D8O95759 1140 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 SYNRGQ9UMZ2 1314 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPG11-210ENST00000558319 MIER3Q7Z3K6 550 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 TSTA3Q13630 321 aaPredicted RBP15.48■□□□□ 0.07
SPG11-210ENST00000558319 KRT71Q3SY84 523 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 PCF11O94913 1555 aaKnown RBP15.48■□□□□ 0.07
SPG11-210ENST00000558319 STRN3Q13033 797 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 I3L4J1 428 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 DOK7Q18PE1 504 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 TAB2Q9NYJ8 693 aa15.48■□□□□ 0.07
SPG11-210ENST00000558319 GCNT3O95395 438 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 GAS8O95995 478 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 GNAQP50148 359 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 MYCT1Q8N699 235 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 SEPT10Q9P0V9 454 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 SPDYE16A6NNV3 312 aaPredicted RBP15.47■□□□□ 0.07
SPG11-210ENST00000558319 STX10O60499 249 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 SCNN1DP51172 638 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 STAG1Q8WVM7 1258 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 FAF1Q9UNN5 650 aaPredicted RBP15.47■□□□□ 0.07
SPG11-210ENST00000558319 TCP10L2B9ZVM9 353 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 ADKP55263 362 aaKnown RBP15.47■□□□□ 0.07
SPG11-210ENST00000558319 IGBP1P78318 339 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 DENND2CQ68D51 928 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 ADAT2Q7Z6V5 191 aaKnown RBP15.47■□□□□ 0.07
SPG11-210ENST00000558319 LMTK3Q96Q04 1460 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 CC2D2AQ9P2K1 1620 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 Q3C1V9 767 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 PPFIA1Q13136 1202 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 DCLK2Q8N568 766 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 USP26Q9BXU7 913 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
SPG11-210ENST00000558319 SAT1P21673 171 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 PAK2Q13177 524 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 ANKRD20A3Q5VUR7 823 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPG11-210ENST00000558319 CEP85Q6P2H3 762 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 TRMT44Q8IYL2 757 aaKnown RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 PPP1R16BQ96T49 567 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 MED10Q9BTT4 135 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 BCS1LQ9Y276 419 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 HIBADHP31937 336 aaKnown RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 RASIP1Q5U651 963 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms