RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DCAF15Q66K64 600 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
RTF1-205ENST00000558298 ARMC9Q7Z3E5 817 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTF1-205ENST00000558298 AIDAQ96BJ3 306 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 CLMNQ96JQ2 1002 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 NOL10Q9BSC4 688 aaKnown RBP9.42□□□□□ -0.9
RTF1-205ENST00000558298 OSBPL5Q9H0X9 879 aaPredicted RBP9.42□□□□□ -0.9
RTF1-205ENST00000558298 BOLA2Q9H3K6 86 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 USP40Q9NVE5 1235 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 USP25Q9UHP3 1055 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 ZNF112Q9UJU3 913 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 ANGEL1Q9UNK9 670 aaKnown RBP9.42□□□□□ -0.9
RTF1-205ENST00000558298 MYH8P13535 1937 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 FLT1P17948 1338 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 CDC45O75419 566 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 ZBTB48P10074 688 aaPredicted RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 GJA5P36382 358 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 TM4SF4P48230 202 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 SLC9C2Q5TAH2 1124 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 ANKRD13AQ8IZ07 590 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 MAGEB6Q8N7X4 407 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 EHD4Q9H223 541 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 DDX4Q9NQI0 724 aaKnown RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 RNF186Q9NXI6 227 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 HERC5Q9UII4 1024 aaKnown RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 CASP8AP2Q9UKL3 1982 aa9.41□□□□□ -0.9
RTF1-205ENST00000558298 GREB1LQ9C091 1923 aaPredicted RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 BAZ2AQ9UIF9 1905 aaKnown RBP9.41□□□□□ -0.9
RTF1-205ENST00000558298 LAMA4Q16363 1823 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 ZNF532Q9HCE3 1301 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
RTF1-205ENST00000558298 CYP7A1P22680 504 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 IREB2P48200 963 aaKnown RBP9.4□□□□□ -0.9
RTF1-205ENST00000558298 NOM1Q5C9Z4 860 aaKnown RBP9.4□□□□□ -0.9
RTF1-205ENST00000558298 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 GIMAP6Q6P9H5 292 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 OTUD7AQ8TE49 926 aaPredicted RBP9.4□□□□□ -0.9
RTF1-205ENST00000558298 APPBP2Q92624 585 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 EVI5LQ96CN4 794 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 WNK4Q96J92 1243 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 LNPKQ9C0E8 428 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 TSPY26PQ9H489 355 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 GINM1Q9NU53 330 aa9.4□□□□□ -0.9
RTF1-205ENST00000558298 AATFQ9NY61 560 aaKnown RBP eCLIP9.4□□□□□ -0.9
RTF1-205ENST00000558298 HTTP42858 3142 aa9.4□□□□□ -0.91
RTF1-205ENST00000558298 LOC285556D6RIA3 1793 aa9.4□□□□□ -0.91
RTF1-205ENST00000558298 ROBO3Q96MS0 1386 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 ZMYM6O95789 1325 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 EPB41L2O43491 1005 aaKnown RBP9.39□□□□□ -0.91
RTF1-205ENST00000558298 PRKG1Q13976 671 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 VGLL4Q14135 290 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 SH3BP5LQ7L8J4 393 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 SH3RF3Q8TEJ3 882 aaPredicted RBP9.39□□□□□ -0.91
RTF1-205ENST00000558298 EDC3Q96F86 508 aaKnown RBP9.39□□□□□ -0.91
RTF1-205ENST00000558298 ZNF341Q9BYN7 854 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 ATP8A2Q9NTI2 1148 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 LMBRD1Q9NUN5 540 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 PI4KBQ9UBF8 816 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 SNCAIPQ9Y6H5 919 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
RTF1-205ENST00000558298 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 SPDYE5A6NIY4 337 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 RNF113AO15541 343 aaKnown RBP9.38□□□□□ -0.91
RTF1-205ENST00000558298 REC8O95072 547 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 GNAT2P19087 354 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
RTF1-205ENST00000558298 DHX8Q14562 1220 aaKnown RBP9.38□□□□□ -0.91
RTF1-205ENST00000558298 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTF1-205ENST00000558298 CTR9Q6PD62 1173 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 ZFPM1Q8IX07 1006 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 BEGAINQ9BUH8 593 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 CRNKL1Q9BZJ0 848 aaKnown RBP9.38□□□□□ -0.91
RTF1-205ENST00000558298 ZCCHC17Q9NP64 241 aaKnown RBP9.38□□□□□ -0.91
RTF1-205ENST00000558298 PAXBP1Q9Y5B6 917 aa9.38□□□□□ -0.91
RTF1-205ENST00000558298 DDTLA6NHG4 134 aaPredicted RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 IGF2BP3O00425 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
RTF1-205ENST00000558298 CTNND1O60716 968 aaKnown RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 NT5C2P49902 561 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 INHBEP58166 350 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 GABPAQ06546 454 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 SREBF2Q12772 1141 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 TSHZ3Q63HK5 1081 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 MCTP1Q6DN14 999 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 FOXP4Q8IVH2 680 aaPredicted RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 CNKSR2Q8WXI2 1034 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 ANKRD7Q92527 254 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms