RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RGS19P49795 217 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 SLC9C2Q5TAH2 1124 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 PRRT2Q7Z6L0 340 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 CERS3Q8IU89 383 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 FOXP4Q8IVH2 680 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 CRBNQ96SW2 442 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 DNAJC18Q9H819 358 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 SAP30BPQ9UHR5 308 aaKnown RBP10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 TRIM17Q9Y577 477 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 DOCK3Q8IZD9 2030 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 ADGRA2Q96PE1 1338 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 MAGEB6P1A0A0J9YX57 407 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 USP5P45974 858 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 JAG1P78504 1218 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 C17orf99Q6UX52 265 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 EFCC1Q9HA90 598 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 PAG1Q9NWQ8 432 aa10.65□□□□□ -0.7
SNRPA1-206ENST00000558059 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.71
SNRPA1-206ENST00000558059 PDE4DIPQ5VU43 2346 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 ADD2P35612 726 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 SHROOM1Q2M3G4 852 aaPredicted RBP10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 ZNF280CQ8ND82 737 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 ECHDC1Q9NTX5 307 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 PTPN22Q9Y2R2 807 aa10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 BAZ2AQ9UIF9 1905 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-206ENST00000558059 USP17L5A8MUK1 530 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 CHGBP05060 677 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 HLA-DOAP06340 250 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 CYP2C8P10632 490 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 SPP2Q13103 211 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 GADL1Q6ZQY3 521 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 CRACR2BQ8N4Y2 399 aaPredicted RBP10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 WDR18Q9BV38 432 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 ARHGAP39Q9C0H5 1083 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 SLC45A1Q9Y2W3 748 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 DDX60LQ5H9U9 1706 aaKnown RBP10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 MGAMO43451 1857 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 NAV1Q8NEY1 1877 aa10.63□□□□□ -0.71
SNRPA1-206ENST00000558059 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 GDF11O95390 407 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 ASNSP08243 561 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 BCRP11274 1271 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 CTGFP29279 349 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 PLCD1P51178 756 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 SOX10P56693 466 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 LACTBP83111 547 aaPredicted RBP10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 SH3D19Q5HYK7 790 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 IER5LQ5T953 404 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 TATDN1Q6P1N9 297 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 LCORLQ8N3X6 602 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 PARK7Q99497 189 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 CRNKL1Q9BZJ0 848 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 EHD4Q9H223 541 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 ARMT1Q9H993 441 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 GINM1Q9NU53 330 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 AGTPBP1Q9UPW5 1226 aa10.62□□□□□ -0.71
SNRPA1-206ENST00000558059 PRKAB2O43741 272 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 MBD4O95243 580 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 NUBP1P53384 320 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 HMGCS2P54868 508 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 GABPAQ06546 454 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 ARHGEF6Q15052 776 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 UBE3CQ15386 1083 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 TTC6Q86TZ1 520 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 OTUD7AQ8TE49 926 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 SDR42E1Q8WUS8 393 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 TRIM34Q9BYJ4 488 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 DCP1AQ9NPI6 582 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 ZBTB21Q9ULJ3 1066 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 BRCA2P51587 3418 aa10.61□□□□□ -0.71
SNRPA1-206ENST00000558059 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 GH2P01242 217 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 POLR3DP05423 398 aaPredicted RBP10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 CYP2D6P10635 497 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 SHMT1P34896 483 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 PSMC4P43686 418 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 BACE1P56817 501 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 HDAC1Q13547 482 aaPredicted RBP10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 KIF22Q14807 665 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 ARMC5Q96C12 935 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 GPATCH3Q96I76 525 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 TRIM47Q96LD4 638 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 AS3MTQ9HBK9 375 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 MCM9Q9NXL9 1143 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 MYH8P13535 1937 aa10.6□□□□□ -0.71
SNRPA1-206ENST00000558059 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms