RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 NBPF12Q5TAG4 269 aaPredicted RBP10.88□□□□□ -0.67
CHD8-214ENST00000557727 FAM151AQ8WW52 585 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 FAM227BQ96M60 508 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 STRBPQ96SI9 672 aaKnown RBP10.88□□□□□ -0.67
CHD8-214ENST00000557727 ARMT1Q9H993 441 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 PPP2R3BQ9Y5P8 575 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 PTPRFP10586 1907 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 THSD7BQ9C0I4 1608 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 MAGEB6P1A0A0J9YX57 407 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 DDTLA6NHG4 134 aaPredicted RBP10.87□□□□□ -0.67
CHD8-214ENST00000557727 PRKAB2O43741 272 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 BAG3O95817 575 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 TCP10Q12799 353 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 TNFAIP1Q13829 316 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 BMP2KLQ5H9B9 411 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 C6orf132Q5T0Z8 1188 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 TEX11Q8IYF3 940 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 TGFBRAP1Q8WUH2 860 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 OSBPL5Q9H0X9 879 aaPredicted RBP10.87□□□□□ -0.67
CHD8-214ENST00000557727 FZD1Q9UP38 647 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 CEP350Q5VT06 3117 aa10.87□□□□□ -0.67
CHD8-214ENST00000557727 GREB1LQ9C091 1923 aaPredicted RBP10.87□□□□□ -0.67
CHD8-214ENST00000557727 GSG1L2A8MUP6 293 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 SMIM22K7EJ46 135 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 DPYSL4O14531 572 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 GPAA1O43292 621 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 MAP3K10Q02779 954 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 NMIQ13287 307 aaPredicted RBP10.86□□□□□ -0.67
CHD8-214ENST00000557727 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 ZNF589Q86UQ0 364 aaPredicted RBP10.86□□□□□ -0.67
CHD8-214ENST00000557727 METTL16Q86W50 562 aaKnown RBP10.86□□□□□ -0.67
CHD8-214ENST00000557727 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
CHD8-214ENST00000557727 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
CHD8-214ENST00000557727 CELF2O95319 508 aaKnown RBP10.85□□□□□ -0.67
CHD8-214ENST00000557727 CHMLP26374 656 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 APLP1P51693 650 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 PICALMQ13492 652 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 CERS3Q8IU89 383 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 MAPKAPK5Q8IW41 473 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
CHD8-214ENST00000557727 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 DCP1AQ9NPI6 582 aaPredicted RBP10.85□□□□□ -0.67
CHD8-214ENST00000557727 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
CHD8-214ENST00000557727 HSPA6P17066 643 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 TNNI2P48788 182 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 HTRA3P83110 453 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 SAPCD2Q86UD0 394 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 HELLSQ9NRZ9 838 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 PALD1Q9ULE6 856 aa10.84□□□□□ -0.67
CHD8-214ENST00000557727 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 TMEM88BA6NKF7 163 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 USP2O75604 605 aaPredicted RBP10.83□□□□□ -0.68
CHD8-214ENST00000557727 CYP2D6P10635 497 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 PLCD1P51178 756 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 GABPAQ06546 454 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 RRP1BQ14684 758 aaKnown RBP10.83□□□□□ -0.68
CHD8-214ENST00000557727 MCMDC2Q4G0Z9 681 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 LDLRAD1Q5T700 205 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 AIDAQ96BJ3 306 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 NOL10Q9BSC4 688 aaKnown RBP10.83□□□□□ -0.68
CHD8-214ENST00000557727 CRNKL1Q9BZJ0 848 aaKnown RBP10.83□□□□□ -0.68
CHD8-214ENST00000557727 GBA2Q9HCG7 927 aaPredicted RBP10.83□□□□□ -0.68
CHD8-214ENST00000557727 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 TLL2Q9Y6L7 1015 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 SLC4A4Q9Y6R1 1079 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 PCNTO95613 3336 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 CCDC171Q6TFL3 1326 aa10.83□□□□□ -0.68
CHD8-214ENST00000557727 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 CYP2D7A0A087X1C5 515 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 FKBP1BP68106 108 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 LRRFIP1Q32MZ4 808 aaKnown RBP10.82□□□□□ -0.68
CHD8-214ENST00000557727 GIMAP6Q6P9H5 292 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
CHD8-214ENST00000557727 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
CHD8-214ENST00000557727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.82□□□□□ -0.689e-7■■■□□ 15.2
CHD8-214ENST00000557727 KLRG1Q96E93 195 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 ZFRQ96KR1 1074 aaKnown RBP10.82□□□□□ -0.68
CHD8-214ENST00000557727 CSRNP1Q96S65 589 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 ZNF408Q9H9D4 720 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 ATP8A2Q9NTI2 1148 aa10.82□□□□□ -0.68
CHD8-214ENST00000557727 SAP30BPQ9UHR5 308 aaKnown RBP10.82□□□□□ -0.68
CHD8-214ENST00000557727 RASSF10A6NK89 507 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 FAM196BA6NMK8 535 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
CHD8-214ENST00000557727 SGSM2O43147 1006 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 HSPD1P10809 573 aaKnown RBP10.81□□□□□ -0.68
CHD8-214ENST00000557727 USP5P45974 858 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 JAG1P78504 1218 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 SUPT20HL1Q3ZLR7 823 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 SBK1Q52WX2 424 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms