RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 PTPRAP18433 802 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 SDSP20132 328 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 SHMT1P34896 483 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 MAP2K2P36507 400 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 ZSCAN25Q6NSZ9 544 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
PRKCH-226ENST00000557585 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 CSADQ9Y600 493 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 TACC3Q9Y6A5 838 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 COL2A1P02458 1487 aaPredicted RBP12.58□□□□□ -0.4
PRKCH-226ENST00000557585 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
PRKCH-226ENST00000557585 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 TBC1D12O60347 775 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 TRPA1O75762 1119 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-226ENST00000557585 NEFLP07196 543 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 NOL9Q5SY16 702 aaKnown RBP12.57□□□□□ -0.4
PRKCH-226ENST00000557585 CENPQQ7L2Z9 268 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-226ENST00000557585 CLEC10AQ8IUN9 316 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 SCYL3Q8IZE3 742 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 BRI3BPQ8WY22 251 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 INCENPQ9NQS7 918 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 RNF186Q9NXI6 227 aa12.57□□□□□ -0.4
PRKCH-226ENST00000557585 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
PRKCH-226ENST00000557585 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
PRKCH-226ENST00000557585 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
PRKCH-226ENST00000557585 HSPA8P11142 646 aaKnown RBP12.56□□□□□ -0.4
PRKCH-226ENST00000557585 GABPAQ06546 454 aa12.56□□□□□ -0.4
PRKCH-226ENST00000557585 MOGSQ13724 837 aa12.56□□□□□ -0.4
PRKCH-226ENST00000557585 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
PRKCH-226ENST00000557585 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
PRKCH-226ENST00000557585 DHX36Q9H2U1 1008 aaKnown RBP12.56□□□□□ -0.4
PRKCH-226ENST00000557585 ZHX2Q9Y6X8 837 aa12.56□□□□□ -0.4
PRKCH-226ENST00000557585 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
PRKCH-226ENST00000557585 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
PRKCH-226ENST00000557585 GUCY1A2P33402 732 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 CAP2P40123 477 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 TM4SF4P48230 202 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 LBX1P52954 281 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 TMED8Q6PL24 325 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-226ENST00000557585 CWC27Q6UX04 472 aaKnown RBP12.55□□□□□ -0.4
PRKCH-226ENST00000557585 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-226ENST00000557585 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 NKX2-3Q8TAU0 364 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 HOOK2Q96ED9 719 aa12.55□□□□□ -0.4
PRKCH-226ENST00000557585 MYH7P12883 1935 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 CCL15-CCL14A0A0B4J2E2 113 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
PRKCH-226ENST00000557585 GH2P01242 217 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 APPP05067 770 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 HLA-DOAP06340 250 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-226ENST00000557585 MAP2K1Q02750 393 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-226ENST00000557585 PPIL2Q13356 520 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 CCL15Q16663 113 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 IER5LQ5T953 404 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 IFNL3Q8IZI9 196 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 EHD4Q9H223 541 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 ATP8A2Q9NTI2 1148 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 HERC5Q9UII4 1024 aaKnown RBP12.54□□□□□ -0.4
PRKCH-226ENST00000557585 SERPINB13Q9UIV8 391 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
PRKCH-226ENST00000557585 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 BTBD19C9JJ37 291 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 PRDM1O75626 825 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 AKR1B1P15121 316 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 CDK8P49336 464 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 CAP1Q01518 475 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 KCNH4Q9UQ05 1017 aa12.53□□□□□ -0.4
PRKCH-226ENST00000557585 MYH1P12882 1939 aa12.52□□□□□ -0.4
PRKCH-226ENST00000557585 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.4
PRKCH-226ENST00000557585 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-226ENST00000557585 MANSC4A6NHS7 340 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-226ENST00000557585 SEC24BO95487 1268 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 TDO2P48775 406 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 CTDSPL2Q05D32 466 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 PPATQ06203 517 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 SPP2Q13103 211 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 SEPT2Q15019 361 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 MCMDC2Q4G0Z9 681 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-226ENST00000557585 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 ACER1Q8TDN7 264 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 HELLSQ9NRZ9 838 aa12.52□□□□□ -0.41
PRKCH-226ENST00000557585 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms