RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SPOCD1Q6ZMY3 1216 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 BHLHE22Q8NFJ8 381 aaPredicted RBP5.07□□□□□ -1.6
FOXN3-216ENST00000557496 FAM84AQ96KN4 292 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 FRMD6Q96NE9 622 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 SLC38A3Q99624 504 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 C19orf73Q9NVV2 129 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 FAM53CQ9NYF3 392 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 TPX2Q9ULW0 747 aaKnown RBP5.07□□□□□ -1.6
FOXN3-216ENST00000557496 ST14Q9Y5Y6 855 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 H3BS24 57 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 GNA15P30679 374 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 AFMP43652 599 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 ETF1P62495 437 aaKnown RBP5.06□□□□□ -1.6
FOXN3-216ENST00000557496 RPS26P62854 115 aaKnown RBP5.06□□□□□ -1.6
FOXN3-216ENST00000557496 FGD1P98174 961 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 MLANAQ16655 118 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 CDKAL1Q5VV42 579 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 PRAMEF13Q5VWM6 474 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 ZNF746Q6NUN9 644 aaPredicted RBP5.06□□□□□ -1.6
FOXN3-216ENST00000557496 LETMD1Q6P1Q0 360 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 HID1Q8IV36 788 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 RIN3Q8TB24 985 aa5.06□□□□□ -1.6
FOXN3-216ENST00000557496 LIN37Q96GY3 246 aaPredicted RBP5.06□□□□□ -1.6
FOXN3-216ENST00000557496 GFRA2O00451 464 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 CST3P01034 146 aaPredicted RBP5.05□□□□□ -1.6
FOXN3-216ENST00000557496 GLI1P08151 1106 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 EIF4BP23588 611 aaKnown RBP5.05□□□□□ -1.6
FOXN3-216ENST00000557496 GRK4P32298 578 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 GDNFP39905 211 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 SEPT6Q14141 434 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 CCDC85BQ15834 202 aaPredicted RBP5.05□□□□□ -1.6
FOXN3-216ENST00000557496 THAP5Q7Z6K1 395 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 CILP2Q8IUL8 1156 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 NPAS4Q8IUM7 802 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 TACC3Q9Y6A5 838 aa5.05□□□□□ -1.6
FOXN3-216ENST00000557496 PRPF40AO75400 957 aaKnown RBP5.04□□□□□ -1.6
FOXN3-216ENST00000557496 TSPAN15O95858 294 aa5.04□□□□□ -1.6
FOXN3-216ENST00000557496 KIR3DL1P43629 444 aa5.04□□□□□ -1.6
FOXN3-216ENST00000557496 KIRREL1Q96J84 757 aa5.04□□□□□ -1.6
FOXN3-216ENST00000557496 COX4I2Q96KJ9 171 aa5.04□□□□□ -1.6
FOXN3-216ENST00000557496 PCDHB5Q9Y5E4 795 aa5.04□□□□□ -1.6
FOXN3-216ENST00000557496 RBAK-RBAKDNI3L0D1 243 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 TNK2Q07912 1038 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 FBLN7Q53RD9 439 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 AGMOQ6ZNB7 445 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 MRPL41Q8IXM3 137 aaKnown RBP5.03□□□□□ -1.6
FOXN3-216ENST00000557496 XAGE3Q8WTP9 111 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 TJP2Q9UDY2 1190 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 TIMELESSQ9UNS1 1208 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 AK5Q9Y6K8 562 aa5.03□□□□□ -1.6
FOXN3-216ENST00000557496 CBX7O95931 251 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 CYP7A1P22680 504 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 LIG3P49916 1009 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 MPZL3Q6UWV2 235 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 PRR23BQ6ZRT6 265 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 UBE2FQ969M7 185 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 ALPK1Q96QP1 1244 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 PPP1R16BQ96T49 567 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 DPH2Q9BQC3 489 aaPredicted RBP5.02□□□□□ -1.61
FOXN3-216ENST00000557496 RNF19AQ9NV58 838 aa5.02□□□□□ -1.61
FOXN3-216ENST00000557496 PGRP06401 933 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 LMNB1P20700 586 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 RAP1GAPP47736 663 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 TMEM67Q5HYA8 995 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 CDH24Q86UP0 819 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 PIWIL2Q8TC59 973 aaKnown RBP5.01□□□□□ -1.61
FOXN3-216ENST00000557496 CCDC120Q96HB5 630 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 TMEM87BQ96K49 555 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 MIR1-1HGQ9H1L0 117 aa5.01□□□□□ -1.61
FOXN3-216ENST00000557496 ESR1P03372 595 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 KRT1P04264 644 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 TFE3P19532 575 aaPredicted RBP5□□□□□ -1.61
FOXN3-216ENST00000557496 MAP3K11Q16584 847 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 MEI1Q5TIA1 1274 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 SLC6A19Q695T7 634 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 TMPRSS7Q7RTY8 843 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 DNAJB8Q8NHS0 232 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 Q96M66 194 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 DUSP9Q99956 384 aaKnown RBP5□□□□□ -1.61
FOXN3-216ENST00000557496 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 SLAMF8Q9P0V8 285 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 ZSWIM5Q9P217 1185 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 ADAM30Q9UKF2 790 aa5□□□□□ -1.61
FOXN3-216ENST00000557496 DNAJC25-GNG10A0A024R161 153 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 CFPP27918 469 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 ETV3P41162 512 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 PDE4BQ07343 736 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 TSNAXIP1Q2TAA8 658 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 RALGPS1Q5JS13 557 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 SYDE1Q6ZW31 735 aaPredicted RBP4.99□□□□□ -1.61
FOXN3-216ENST00000557496 TTC6Q86TZ1 520 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 C1QL4Q86Z23 238 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 MCATQ8IVS2 390 aaKnown RBP4.99□□□□□ -1.61
FOXN3-216ENST00000557496 ACSF2Q96CM8 615 aaPredicted RBP4.99□□□□□ -1.61
FOXN3-216ENST00000557496 TOX2Q96NM4 488 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 TMEM59LQ9UK28 342 aa4.99□□□□□ -1.61
FOXN3-216ENST00000557496 PATL2C9JE40 543 aaKnown RBP4.98□□□□□ -1.61
FOXN3-216ENST00000557496 RLBP1P12271 317 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms