RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 GIMAP6Q6P9H5 292 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 CTR9Q6PD62 1173 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 CWC27Q6UX04 472 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 NACAP1Q9BZK3 213 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 CCDC171Q6TFL3 1326 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 CCL15-CCL14A0A0B4J2E2 113 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 PATL2C9JE40 543 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 FOXN1O15353 648 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 ASNSP08243 561 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 SHMT1P34896 483 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 GABPAQ06546 454 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 SNAPC2Q13487 334 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 CCL15Q16663 113 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 IFNL3Q8IZI9 196 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 DYNLL2Q96FJ2 89 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 NAPBQ9H115 298 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 ZHX2Q9Y6X8 837 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 ROBO3Q96MS0 1386 aa12.65□□□□□ -0.38
HNRNPC-232ENST00000557442 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 CA12O43570 354 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 DSG3P32926 999 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 TM4SF4P48230 202 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 INHBEP58166 350 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
HNRNPC-232ENST00000557442 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 FOXP2O15409 715 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 TRPA1O75762 1119 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 GH2P01242 217 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 CETPP11597 493 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 C16orf86Q6ZW13 317 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 STK11IPQ8N1F8 1099 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 BRI3BPQ8WY22 251 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 AS3MTQ9HBK9 375 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 KCNH4Q9UQ05 1017 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 ZSWIM8A7E2V4 1837 aa12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 COL11A1P12107 1806 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-232ENST00000557442 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 CDK8P49336 464 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 CTCFP49711 727 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 JAG1P78504 1218 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 ZNF280CQ8ND82 737 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 TBC1D2Q9BYX2 928 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 GINM1Q9NU53 330 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 RAD50Q92878 1312 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 CXCL11O14625 94 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 PPARAQ07869 468 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 SPP2Q13103 211 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 RAB3GAP1Q15042 981 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 PTPN18Q99952 460 aa12.62□□□□□ -0.39
HNRNPC-232ENST00000557442 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 A0A0G2JLL6 359 aaPredicted RBP12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 SLC3A2P08195 630 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 AKR1B1P15121 316 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 CHMLP26374 656 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 LBX1P52954 281 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 MTMR2Q13614 643 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 GADL1Q6ZQY3 521 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 PRRT2Q7Z6L0 340 aaPredicted RBP12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 FEZ1Q99689 392 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 IL25Q9H293 177 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
HNRNPC-232ENST00000557442 RLFQ13129 1914 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 HMGCS2P54868 508 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 PDE4BQ07343 736 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 SEPT2Q15019 361 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 TAF1CQ15572 869 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 ALX1Q15699 326 aa12.6□□□□□ -0.39
HNRNPC-232ENST00000557442 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms