RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 LBHD1Q9BQE6 289 aaPredicted RBP12.56□□□□□ -0.4
RDH11-210ENST00000557331 HMG20BQ9P0W2 317 aa12.56□□□□□ -0.4
RDH11-210ENST00000557331 PA2G4Q9UQ80 394 aaKnown RBP12.56□□□□□ -0.4
RDH11-210ENST00000557331 DNAH12Q6ZR08 3092 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
RDH11-210ENST00000557331 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 USP14P54578 494 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 ERVK-9P63128 1117 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 ERVK-24P63145 666 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 TFCP2Q12800 502 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 G3BP1Q13283 466 aaKnown RBP eCLIP12.55□□□□□ -0.4
RDH11-210ENST00000557331 MTMR2Q13614 643 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 MFSD14CQ5VZR4 134 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 PLEKHH3Q7Z736 793 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
RDH11-210ENST00000557331 APBA2Q99767 749 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 CWC22Q9HCG8 908 aaKnown RBP12.55□□□□□ -0.4
RDH11-210ENST00000557331 NOB1Q9ULX3 412 aaKnown RBP12.55□□□□□ -0.4
RDH11-210ENST00000557331 RABGAP1Q9Y3P9 1069 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 LOC285556D6RIA3 1793 aa12.55□□□□□ -0.4
RDH11-210ENST00000557331 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
RDH11-210ENST00000557331 NAA16Q6N069 864 aaPredicted RBP12.54□□□□□ -0.4
RDH11-210ENST00000557331 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
RDH11-210ENST00000557331 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
RDH11-210ENST00000557331 USP6NLQ92738 828 aa12.54□□□□□ -0.4
RDH11-210ENST00000557331 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
RDH11-210ENST00000557331 PRKAG2Q9UGJ0 569 aa12.54□□□□□ -0.4
RDH11-210ENST00000557331 CACNB2Q08289 660 aaPredicted RBP12.53□□□□□ -0.4
RDH11-210ENST00000557331 MORN1Q5T089 497 aa12.53□□□□□ -0.4
RDH11-210ENST00000557331 GPR142Q7Z601 462 aa12.53□□□□□ -0.4
RDH11-210ENST00000557331 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
RDH11-210ENST00000557331 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
RDH11-210ENST00000557331 EDC3Q96F86 508 aaKnown RBP12.53□□□□□ -0.4
RDH11-210ENST00000557331 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
RDH11-210ENST00000557331 ALPK3Q96L96 1907 aa12.52□□□□□ -0.4
RDH11-210ENST00000557331 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
RDH11-210ENST00000557331 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 FAM196BA6NMK8 535 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 GNAI2P04899 355 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 SYN1P17600 705 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 TRIM32Q13049 653 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 LHX8Q68G74 356 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.41
RDH11-210ENST00000557331 C12orf42Q96LP6 360 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 MEIS3Q99687 375 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.52□□□□□ -0.41
RDH11-210ENST00000557331 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 PFASO15067 1338 aa12.52□□□□□ -0.41
RDH11-210ENST00000557331 HOXC6P09630 235 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 LBX2Q6XYB7 198 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 ARRDC4Q8NCT1 418 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
RDH11-210ENST00000557331 TGFBRAP1Q8WUH2 860 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 LPAR1Q92633 364 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 TXNRD2Q9NNW7 524 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
RDH11-210ENST00000557331 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
RDH11-210ENST00000557331 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
RDH11-210ENST00000557331 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 DNM1LO00429 736 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 STRNO43815 780 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 MCAMP43121 646 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 RRP1BQ14684 758 aaKnown RBP12.5□□□□□ -0.41
RDH11-210ENST00000557331 TTC39AQ5SRH9 613 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 FLT1P17948 1338 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 ATAD5Q96QE3 1844 aa12.5□□□□□ -0.41
RDH11-210ENST00000557331 PTPREP23469 700 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 LRRC26Q2I0M4 334 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 Q3C1V9 767 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 Q7L0L9 218 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.49□□□□□ -0.41
RDH11-210ENST00000557331 FEZ1Q99689 392 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 PAGR1Q9BTK6 254 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 KIAA1683Q9H0B3 1180 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 EHD4Q9H223 541 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 PORCNQ9H237 461 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 HOXC10Q9NYD6 342 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 DDX20Q9UHI6 824 aaKnown RBP12.49□□□□□ -0.41
RDH11-210ENST00000557331 VCANP13611 3396 aa12.49□□□□□ -0.41
RDH11-210ENST00000557331 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
RDH11-210ENST00000557331 RARSP54136 660 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms