RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 C1orf53Q5VUE5 145 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 PSMD1Q99460 953 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 MKNK1Q9BUB5 465 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 C1orf115Q9H7X2 142 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-247ENST00000557311 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 PHF20L1A8MW92 1017 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 TRAF5O00463 557 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 ADAM23O75077 832 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 HMOX1P09601 288 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 AMPD1P23109 780 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 EPS15P42566 896 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATXN3-247ENST00000557311 TEFQ10587 303 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 TMEM164Q5U3C3 297 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 OLFM4Q6UX06 510 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 C1orf229Q6ZS94 237 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-247ENST00000557311 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 SUSD3Q96L08 255 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 OXCT2Q9BYC2 517 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-247ENST00000557311 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 ZMIZ1Q9ULJ6 1067 aa6.49□□□□□ -1.37
ATXN3-247ENST00000557311 GPC6Q9Y625 555 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-247ENST00000557311 GNAT3A8MTJ3 354 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 OIP5O43482 229 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 CELF2O95319 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-247ENST00000557311 HIRAP54198 1017 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-247ENST00000557311 TNP2Q05952 138 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 ELOAQ14241 798 aaKnown RBP6.48□□□□□ -1.37
ATXN3-247ENST00000557311 RTN1Q16799 776 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 SWI5Q1ZZU3 235 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 XP32Q5T750 250 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 STAG2Q8N3U4 1231 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 ADARB2Q9NS39 739 aaKnown RBP6.48□□□□□ -1.37
ATXN3-247ENST00000557311 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-247ENST00000557311 KNSTRNQ9Y448 316 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
ATXN3-247ENST00000557311 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 SHISA8B8ZZ34 492 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 DIAPH1O60610 1272 aaKnown RBP6.47□□□□□ -1.37
ATXN3-247ENST00000557311 FAM157BP0CG42 384 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 NOGQ13253 232 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 UBAP2LQ14157 1087 aaKnown RBP6.47□□□□□ -1.37
ATXN3-247ENST00000557311 ERICH6BQ5W0A0 696 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 GALNT6Q8NCL4 622 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 ZNF280CQ8ND82 737 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 BRD7Q9NPI1 651 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 KLK14Q9P0G3 267 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
ATXN3-247ENST00000557311 KRBA1A5PL33 1030 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 FAM177BA6PVY3 158 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 NEURL1BA8MQ27 555 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 SNRPA1P09661 255 aaKnown RBP6.46□□□□□ -1.38
ATXN3-247ENST00000557311 WEE1P30291 646 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 HOXA10P31260 410 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-247ENST00000557311 TJP1Q07157 1748 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 TBC1D8BQ0IIM8 1120 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 CRY2Q49AN0 593 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 SAMD5Q5TGI4 173 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-247ENST00000557311 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 GGA1Q9UJY5 639 aa6.46□□□□□ -1.38
ATXN3-247ENST00000557311 GDF2Q9UK05 429 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-247ENST00000557311 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 C2CD2LO14523 706 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 KCNQ3O43525 872 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 ATP2B4P23634 1241 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 ZEB1P37275 1124 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 SOX10P56693 466 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 PCBP4P57723 403 aaKnown RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 SFSWAPQ12872 951 aaKnown RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 FKBP5Q13451 457 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 NAA30Q147X3 362 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 PODNQ7Z5L7 613 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 GOLGA6L1Q8N7Z2 621 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 RBM17Q96I25 401 aaKnown RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 PNMA5Q96PV4 448 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 GLIS2Q9BZE0 524 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-247ENST00000557311 NYXQ9GZU5 481 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 IGFLR1Q9H665 355 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 NDFIP2Q9NV92 336 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 SAGE1Q9NXZ1 904 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 KCNH4Q9UQ05 1017 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 MRC1P22897 1456 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 SCN4AP35499 1836 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
ATXN3-247ENST00000557311 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms