RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 MIPEPQ99797 713 aa3.86□□□□□ -1.79
PTPN21-209ENST00000557249 BCO2Q9BYV7 579 aa3.86□□□□□ -1.79
PTPN21-209ENST00000557249 CEP44Q9C0F1 390 aa3.86□□□□□ -1.79
PTPN21-209ENST00000557249 PARD6AQ9NPB6 346 aa3.86□□□□□ -1.79
PTPN21-209ENST00000557249 PCDHA4Q9UN74 947 aa3.86□□□□□ -1.79
PTPN21-209ENST00000557249 CCDC9Q9Y3X0 531 aaKnown RBP3.86□□□□□ -1.79
PTPN21-209ENST00000557249 ZBTB7CA1YPR0 619 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 ARID3CA6NKF2 412 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 PRR33A8MZF0 331 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 SLITRK5O94991 958 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 CBX7O95931 251 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 BMP7P18075 431 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 HK2P52789 917 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 TMEM132EQ6IEE7 984 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 LLGL2Q6P1M3 1020 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 DBX2Q6ZNG2 339 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 C22orf34Q6ZV56 151 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 UBE3DQ7Z6J8 389 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 MFSD2AQ8NA29 543 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 SYTL4Q96C24 671 aaPredicted RBP3.85□□□□□ -1.79
PTPN21-209ENST00000557249 TMEM59LQ9UK28 342 aa3.85□□□□□ -1.79
PTPN21-209ENST00000557249 PRAMEF27A3QJZ7 478 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 GPR182O15218 404 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 PDIA4P13667 645 aaKnown RBP3.84□□□□□ -1.79
PTPN21-209ENST00000557249 NTF4P34130 210 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 SERPINB4P48594 390 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 ETF1P62495 437 aaKnown RBP3.84□□□□□ -1.79
PTPN21-209ENST00000557249 ARHGAP4P98171 946 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 NXPE4Q6UWF7 544 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 MPRIPQ6WCQ1 1025 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 TPTE2Q6XPS3 522 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 TMPRSS7Q7RTY8 843 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 HDXQ7Z353 690 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 COX4I2Q96KJ9 171 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 NECAB3Q96P71 396 aaPredicted RBP3.84□□□□□ -1.79
PTPN21-209ENST00000557249 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 ST14Q9Y5Y6 855 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 CAPN6Q9Y6Q1 641 aa3.84□□□□□ -1.79
PTPN21-209ENST00000557249 DNAJC25-GNG10A0A024R161 153 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 LOC105371045A0A1W2PR82 267 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 CARNS1A5YM72 827 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 RFXAPO00287 272 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 FOXD2O60548 495 aaPredicted RBP3.83□□□□□ -1.8
PTPN21-209ENST00000557249 SRFP11831 508 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 SYN1P17600 705 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 GSTT1P30711 240 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 KIR3DL1P43629 444 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 RING1Q06587 406 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 TCERG1LQ5VWI1 586 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 ERICH6BQ5W0A0 696 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 SCARA3Q6AZY7 606 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 LETMD1Q6P1Q0 360 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 CREG2Q8IUH2 290 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 GRIN3AQ8TCU5 1115 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 C20orf173Q96LM9 149 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 SLC6A17Q9H1V8 727 aa3.83□□□□□ -1.8
PTPN21-209ENST00000557249 CNOT6Q9ULM6 557 aaKnown RBP3.83□□□□□ -1.8
PTPN21-209ENST00000557249 HPXP02790 462 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 ERVFC1P60507 584 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 NFIXQ14938 502 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTPN21-209ENST00000557249 ZNF385BQ569K4 471 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 RALGPS1Q5JS13 557 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 PI16Q6UXB8 463 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 HID1Q8IV36 788 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 TMEM151BQ8IW70 566 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 OXR1Q8N573 874 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 BAHD1Q8TBE0 780 aaPredicted RBP3.82□□□□□ -1.8
PTPN21-209ENST00000557249 ALKBH8Q96BT7 664 aaKnown RBP3.82□□□□□ -1.8
PTPN21-209ENST00000557249 CACNA2D2Q9NY47 1150 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 CYP8B1Q9UNU6 501 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 JAG2Q9Y219 1238 aa3.82□□□□□ -1.8
PTPN21-209ENST00000557249 SEMA7AO75326 666 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 BMP6P22004 513 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 DLG4P78352 724 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 SLBPQ14493 270 aaKnown RBP eCLIP3.81□□□□□ -1.8
PTPN21-209ENST00000557249 ZNF605Q86T29 641 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 IRF2BP1Q8IU81 584 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 LILRA2Q8N149 483 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 CCDC82Q8N4S0 544 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 PIWIL2Q8TC59 973 aaKnown RBP3.81□□□□□ -1.8
PTPN21-209ENST00000557249 XAGE3Q8WTP9 111 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 DHX38Q92620 1227 aaKnown RBP3.81□□□□□ -1.8
PTPN21-209ENST00000557249 WNT10AQ9GZT5 417 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 ADAMTS10Q9H324 1103 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 TRIT1Q9H3H1 467 aaKnown RBP3.81□□□□□ -1.8
PTPN21-209ENST00000557249 PPM1HQ9ULR3 514 aa3.81□□□□□ -1.8
PTPN21-209ENST00000557249 CNTNAP4Q9C0A0 1308 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 ENC1O14682 589 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 SASH1O94885 1247 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 LMNB1P20700 586 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 TRHRP34981 398 aaPredicted RBP3.8□□□□□ -1.8
PTPN21-209ENST00000557249 PDE6BP35913 854 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 CAP2P40123 477 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 ETV3P41162 512 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 TNK2Q07912 1038 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 INPP5AQ14642 412 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 LRFN4Q6PJG9 635 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 PDZD8Q8NEN9 1154 aa3.8□□□□□ -1.8
PTPN21-209ENST00000557249 RIN3Q8TB24 985 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms