RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLC5A6Q9Y289 635 aa7.14□□□□□ -1.27
ATXN3-246ENST00000557030 SNX11Q9Y5W9 270 aa7.14□□□□□ -1.27
ATXN3-246ENST00000557030 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-246ENST00000557030 CST3P01034 146 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-246ENST00000557030 BNIP3Q12983 259 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-246ENST00000557030 ZNF326Q5BKZ1 582 aaKnown RBP7.13□□□□□ -1.27
ATXN3-246ENST00000557030 LDLRAD1Q5T700 205 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 ERMP1Q7Z2K6 904 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
ATXN3-246ENST00000557030 AGBL5Q8NDL9 886 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 FLCNQ8NFG4 579 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 TMEM74Q96NL1 305 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 KCNQ5Q9NR82 932 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 TJP2Q9UDY2 1190 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 GTF2IRD1Q9UHL9 959 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 MAPK8IP1Q9UQF2 711 aa7.13□□□□□ -1.27
ATXN3-246ENST00000557030 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
ATXN3-246ENST00000557030 PF4P02776 101 aa7.12□□□□□ -1.27
ATXN3-246ENST00000557030 CD8BP10966 210 aa7.12□□□□□ -1.27
ATXN3-246ENST00000557030 ETF1P62495 437 aaKnown RBP7.12□□□□□ -1.27
ATXN3-246ENST00000557030 BNC2Q6ZN30 1099 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-246ENST00000557030 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
ATXN3-246ENST00000557030 GATAD2BQ8WXI9 593 aa7.12□□□□□ -1.27
ATXN3-246ENST00000557030 TMEM265A0A087WTH1 108 aa7.11□□□□□ -1.27
ATXN3-246ENST00000557030 F13A1P00488 732 aa7.11□□□□□ -1.27
ATXN3-246ENST00000557030 ZNF865P0CJ78 1059 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-246ENST00000557030 PRAMEF13Q5VWM6 474 aa7.11□□□□□ -1.27
ATXN3-246ENST00000557030 MCATQ8IVS2 390 aaKnown RBP7.11□□□□□ -1.27
ATXN3-246ENST00000557030 TP53INP2Q8IXH6 220 aa7.11□□□□□ -1.27
ATXN3-246ENST00000557030 ACSF2Q96CM8 615 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-246ENST00000557030 FMNL2Q96PY5 1086 aa7.11□□□□□ -1.27
ATXN3-246ENST00000557030 ADAM30Q9UKF2 790 aa7.11□□□□□ -1.27
ATXN3-246ENST00000557030 TOP2AP11388 1531 aaKnown RBP7.11□□□□□ -1.27
ATXN3-246ENST00000557030 F6X3S4 739 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 ITGB5P18084 799 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 LMNB1P20700 586 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 FUT4P22083 530 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 ITGAEP38570 1179 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 TMEM201Q5SNT2 666 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 SLC6A19Q695T7 634 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 JARID2Q92833 1246 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-246ENST00000557030 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
ATXN3-246ENST00000557030 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-246ENST00000557030 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
ATXN3-246ENST00000557030 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 PRR33A8MZF0 331 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 RBAK-RBAKDNI3L0D1 243 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 PGRP06401 933 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 ZNF16P17020 682 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-246ENST00000557030 CD96P40200 585 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 PWP1Q13610 501 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 AOC3Q16853 763 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 TMEM87BQ96K49 555 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 MIPEPQ99797 713 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 KRTAP4-12Q9BQ66 201 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 CORINQ9Y5Q5 1042 aa7.09□□□□□ -1.27
ATXN3-246ENST00000557030 PITPNM2Q9BZ72 1349 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 GREM1O60565 184 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-246ENST00000557030 CLCN7P51798 805 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 PDE4BQ07343 736 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 RELL1Q8IUW5 271 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 COPRSQ9NQ92 184 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 SEMA3GQ9NS98 782 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 KBTBD4Q9NVX7 518 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-246ENST00000557030 ST14Q9Y5Y6 855 aa7.08□□□□□ -1.28
ATXN3-246ENST00000557030 CCDC88BA6NC98 1476 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 ITIH2P19823 946 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 DNAJB8Q8NHS0 232 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 PPP1R13LQ8WUF5 828 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 LRRC3Q9BY71 257 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 ADAMTS6Q9UKP5 1117 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 CAPN6Q9Y6Q1 641 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 SMARCA2P51531 1590 aa7.07□□□□□ -1.28
ATXN3-246ENST00000557030 ZNF792Q3KQV3 632 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 SFRP5Q5T4F7 317 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 FBXL19Q6PCT2 694 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 ARHGAP27Q6ZUM4 889 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 COX4I2Q96KJ9 171 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 BCL11AQ9H165 835 aa7.06□□□□□ -1.28
ATXN3-246ENST00000557030 MBNL3Q9NUK0 354 aaKnown RBP7.06□□□□□ -1.28
ATXN3-246ENST00000557030 PAPLNO95428 1278 aa7.05□□□□□ -1.28
ATXN3-246ENST00000557030 RNASE1P07998 156 aaKnown RBP7.05□□□□□ -1.28
ATXN3-246ENST00000557030 MPP2Q14168 576 aa7.05□□□□□ -1.28
ATXN3-246ENST00000557030 ZNF746Q6NUN9 644 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-246ENST00000557030 SLFN12Q8IYM2 578 aa7.05□□□□□ -1.28
ATXN3-246ENST00000557030 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
ATXN3-246ENST00000557030 ASB11Q8WXH4 323 aa7.05□□□□□ -1.28
ATXN3-246ENST00000557030 DPH2Q9BQC3 489 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-246ENST00000557030 GNAT3A8MTJ3 354 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 MINDY4BA8MYZ0 360 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 UPK3BL1B0FP48 263 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 UPK3BL2E5RIL1 263 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 PLCG1P19174 1290 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 PLCL1Q15111 1095 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms