RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CTSWP56202 376 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 MAP3K10Q02779 954 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 PTPN12Q05209 780 aaKnown RBP6.57□□□□□ -1.36
ATXN3-244ENST00000556898 MTX1Q13505 466 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 AAMPQ13685 434 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 WASHC4Q2M389 1173 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 SLC10A5Q5PT55 438 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 ERICH6Q7L0X2 663 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 CNBD1Q8NA66 436 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 GTPBP3Q969Y2 492 aaKnown RBP6.57□□□□□ -1.36
ATXN3-244ENST00000556898 ACDQ96AP0 544 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 PLA2G12BQ9BX93 195 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 SIL1Q9H173 461 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 DCTPP1Q9H773 170 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
ATXN3-244ENST00000556898 NPHP1O15259 732 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 SRGNP10124 158 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 ECE1P42892 770 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 LRRC24Q50LG9 513 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 ANKRD45Q5TZF3 282 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 RIPOR1Q6ZS17 1223 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 CENPQQ7L2Z9 268 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-244ENST00000556898 SMC5Q8IY18 1101 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 OTUD7AQ8TE49 926 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-244ENST00000556898 CELF1Q92879 486 aaKnown RBP6.56□□□□□ -1.36
ATXN3-244ENST00000556898 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-244ENST00000556898 NYXQ9GZU5 481 aa6.56□□□□□ -1.36
ATXN3-244ENST00000556898 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 WTIPA6NIX2 430 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-244ENST00000556898 HMMRO75330 724 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 SASH1O94885 1247 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 MAP2K2P36507 400 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 SCTRP47872 440 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 RGS3P49796 1198 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 ST5P78524 1137 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 SF3B3Q15393 1217 aaKnown RBP6.55□□□□□ -1.36
ATXN3-244ENST00000556898 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-244ENST00000556898 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
ATXN3-244ENST00000556898 ATG9AQ7Z3C6 839 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 C7orf43Q8WVR3 580 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 NLRP3Q96P20 1036 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 GRIP2Q9C0E4 1043 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 LNPKQ9C0E8 428 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 IL1RAPL2Q9NP60 686 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 COPRSQ9NQ92 184 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 PCDHB9Q9Y5E1 797 aa6.55□□□□□ -1.36
ATXN3-244ENST00000556898 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 FZD9O00144 591 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 SNAP23O00161 211 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 THBS1P07996 1170 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 GPC1P35052 558 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 SOX11P35716 441 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 ERVK-9P63128 1117 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 FOXK2Q01167 660 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 FKBP4Q02790 459 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 NUCB1Q02818 461 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 VAC14Q08AM6 782 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 TFCP2Q12800 502 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 IFIT5Q13325 482 aaKnown RBP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 CCDC57Q2TAC2 916 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 CCDC152Q4G0S7 254 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 TAF7LQ5H9L4 462 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 GPC2Q8N158 579 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 RHPN1Q8TCX5 695 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 GCC1Q96CN9 775 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 GAS2L1Q99501 681 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 NOP58Q9Y2X3 529 aaKnown RBP6.54□□□□□ -1.36
ATXN3-244ENST00000556898 DYRK1BQ9Y463 629 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 LAMB2P55268 1798 aa6.54□□□□□ -1.36
ATXN3-244ENST00000556898 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
ATXN3-244ENST00000556898 ANKRD31Q8N7Z5 1873 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 NRXN2Q9P2S2 1712 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 RIC1Q4ADV7 1423 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-244ENST00000556898 EYA2O00167 538 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 CA12O43570 354 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 TAF5LO75529 589 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 BCRP11274 1271 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 NPR1P16066 1061 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 G3BP1Q13283 466 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATXN3-244ENST00000556898 TSHZ3Q63HK5 1081 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 OLFM4Q6UX06 510 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 CHD1LQ86WJ1 897 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 GMCL1Q96IK5 515 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 CCDC8Q9H0W5 538 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms