RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 KIAA0556O60303 1618 aa6.17□□□□□ -1.42
PCNX1-214ENST00000556849 TDRD9Q8NDG6 1382 aaKnown RBP6.17□□□□□ -1.42
PCNX1-214ENST00000556849 YTHDC2Q9H6S0 1430 aaKnown RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 SPHKAPQ2M3C7 1700 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 CCDC151A5D8V7 595 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TTC36A6NLP5 189 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 GOLIM4O00461 696 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 CTAGE5O15320 804 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 PPFIA4O75335 1185 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TMPOP42166 694 aaKnown RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 ETF1P62495 437 aaKnown RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TUBB2AQ13885 445 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 LRRFIP1Q32MZ4 808 aaKnown RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 HSP90AB2PQ58FF8 381 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 MEI1Q5TIA1 1274 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 LRCH2Q5VUJ6 765 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TADA2BQ86TJ2 420 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TREML1Q86YW5 311 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 GPATCH11Q8N954 259 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 ZNF784Q8NCA9 323 aaPredicted RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 GPR152Q8TDT2 470 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 RABGGTAQ92696 567 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 CCDC74AQ96AQ1 378 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 ZSCAN31Q96LW9 406 aaPredicted RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 SRPK1Q96SB4 655 aaKnown RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 ESYT1Q9BSJ8 1104 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 SPON2Q9BUD6 331 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 RSRP1Q9BUV0 290 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TUBB2BQ9BVA1 445 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 FUT8Q9BYC5 575 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TRIM55Q9BYV6 548 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 GGNBP2Q9H3C7 697 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 CLSTN2Q9H4D0 955 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 NEUROD4Q9HD90 331 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 TMPRSS4Q9NRS4 437 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 ZNF232Q9UNY5 417 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 CNPY2Q9Y2B0 182 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 ATXN2Q99700 1313 aaKnown RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 MSH6P52701 1360 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 PTPRTO14522 1441 aa6.16□□□□□ -1.42
PCNX1-214ENST00000556849 PRG4Q92954 1404 aaPredicted RBP6.16□□□□□ -1.42
PCNX1-214ENST00000556849 AK9Q5TCS8 1911 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 INO80Q9ULG1 1556 aaPredicted RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 POLR3GO15318 223 aaPredicted RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 LILRA1O75019 489 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 EIF3JO75822 258 aaKnown RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 SMC2O95347 1197 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 USP17L7P0C7H9 530 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 NEFHP12036 1026 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 IQCB1Q15051 598 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 DNAJC21Q5F1R6 531 aaKnown RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 RSRC2Q7L4I2 434 aaKnown RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 KIAA0825Q8IV33 1275 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 FMNL3Q8IVF7 1028 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 CCDC144CPQ8IYA2 1237 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 SNX29Q8TEQ0 813 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 DNAAF4Q8WXU2 420 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 CHAMP1Q96JM3 812 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 RNPC3Q96LT9 517 aaKnown RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 MPHOSPH8Q99549 860 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 MTRQ99707 1265 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 ZNF408Q9H9D4 720 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 IL21Q9HBE4 155 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 KLHL42Q9P2K6 505 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 NRBP1Q9UHY1 535 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 TRAK1Q9UPV9 953 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 EXOC6BQ9Y2D4 811 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 FNDC3AQ9Y2H6 1198 aaKnown RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 SUGT1Q9Y2Z0 365 aa6.15□□□□□ -1.42
PCNX1-214ENST00000556849 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
PCNX1-214ENST00000556849 AOX1Q06278 1338 aa6.15□□□□□ -1.43
PCNX1-214ENST00000556849 NPHP3Q7Z494 1330 aa6.15□□□□□ -1.43
PCNX1-214ENST00000556849 CD109Q6YHK3 1445 aa6.15□□□□□ -1.43
PCNX1-214ENST00000556849 URB2Q14146 1524 aaKnown RBP6.15□□□□□ -1.43
PCNX1-214ENST00000556849 ABCA9Q8IUA7 1624 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 GOLGA6L9A6NEM1 432 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 CCDC69A6NI79 296 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 SRGAP3O43295 1099 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 SASH3O75995 380 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 SYT1P21579 422 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 FSHRP23945 695 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 LMAN1P49257 510 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 ZNF165P49910 485 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 SETQ01105 290 aaPredicted RBP6.14□□□□□ -1.43
PCNX1-214ENST00000556849 RAB33AQ14088 237 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 RGL3Q3MIN7 710 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 ANO6Q4KMQ2 910 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 ARSHQ5FYA8 562 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 TTLL5Q6EMB2 1281 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 LUZP1Q86V48 1076 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 CCDC116Q8IYX3 515 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 MICALL1Q8N3F8 863 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 NKX2-3Q8TAU0 364 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 FAM71BQ8TC56 605 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 CNKSR1Q969H4 720 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 DDX11Q96FC9 970 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 PSMD1Q99460 953 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 PLCD4Q9BRC7 762 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms