RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SDR42E1Q8WUS8 393 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
SHMT2-224ENST00000556737 ARMT1Q9H993 441 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 MBD4O95243 580 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 ASNSP08243 561 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 SHMT1P34896 483 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 PLCD1P51178 756 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 HMGCS2P54868 508 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 GABPAQ06546 454 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 UBE3CQ15386 1083 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 WDR18Q9BV38 432 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■□□□ 11.9
SHMT2-224ENST00000556737 DCP1AQ9NPI6 582 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-224ENST00000556737 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
SHMT2-224ENST00000556737 PRKAB2O43741 272 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 CYP2D6P10635 497 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-224ENST00000556737 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-224ENST00000556737 MTMR2Q13614 643 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 ARMC5Q96C12 935 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 TRIM34Q9BYJ4 488 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 AS3MTQ9HBK9 375 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 GINM1Q9NU53 330 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
SHMT2-224ENST00000556737 GREB1LQ9C091 1923 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-224ENST00000556737 TTC41PQ6P2S7 1318 aa12.47□□□□□ -0.41
SHMT2-224ENST00000556737 GH2P01242 217 aa12.47□□□□□ -0.41
SHMT2-224ENST00000556737 BACE1P56817 501 aa12.47□□□□□ -0.41
SHMT2-224ENST00000556737 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
SHMT2-224ENST00000556737 GPATCH3Q96I76 525 aa12.47□□□□□ -0.41
SHMT2-224ENST00000556737 PUS7LQ9H0K6 701 aaKnown RBP12.47□□□□□ -0.41
SHMT2-224ENST00000556737 MCM9Q9NXL9 1143 aa12.47□□□□□ -0.41
SHMT2-224ENST00000556737 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 A0A0G2JMZ2 1700 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 SMIM22K7EJ46 135 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 GNRH1P01148 92 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 OSBPP22059 807 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 SLC44A5Q8NCS7 719 aa12.46□□□□□ -0.41
SHMT2-224ENST00000556737 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-224ENST00000556737 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-224ENST00000556737 PSMC4P43686 418 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 KIF22Q14807 665 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 ARHGEF6Q15052 776 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 ZSCAN25Q6NSZ9 544 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 SMCR8Q8TEV9 937 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-224ENST00000556737 OSBP2Q969R2 916 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 ZNF333Q96JL9 665 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 ASCC2Q9H1I8 757 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-224ENST00000556737 ATP8A2Q9NTI2 1148 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
SHMT2-224ENST00000556737 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 CYP2D7A0A087X1C5 515 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 C19orf81C9J6K1 198 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
SHMT2-224ENST00000556737 MX1P20591 662 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 HOXA7P31268 230 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-224ENST00000556737 MLLT1Q03111 559 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-224ENST00000556737 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 ABCB5Q2M3G0 1257 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 CERKLQ49MI3 558 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-224ENST00000556737 EXOC6Q8TAG9 804 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 APPBP2Q92624 585 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 DYNLL2Q96FJ2 89 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
SHMT2-224ENST00000556737 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 RLFQ13129 1914 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 MKI67P46013 3256 aaKnown RBP12.43□□□□□ -0.42
SHMT2-224ENST00000556737 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 M0R2C6 588 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
SHMT2-224ENST00000556737 PRMT2P55345 433 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 FCGRTP55899 365 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 PRKCZQ05513 592 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHMT2-224ENST00000556737 AAMPQ13685 434 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 C12orf60Q5U649 245 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 POTEEQ6S8J3 1075 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 ACER1Q8TDN7 264 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 STRBPQ96SI9 672 aaKnown RBP12.43□□□□□ -0.42
SHMT2-224ENST00000556737 KIAA1683Q9H0B3 1180 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-224ENST00000556737 TMOD4Q9NZQ9 345 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 MORF4L1Q9UBU8 362 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 SWAP70Q9UH65 585 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
SHMT2-224ENST00000556737 GSG1L2A8MUP6 293 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms