RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DAGLAQ9Y4D2 1042 aa21.24■□□□□ 0.99
SDR39U1-220ENST00000556548 STK36Q9NRP7 1315 aa21.24■□□□□ 0.99
SDR39U1-220ENST00000556548 IGSF3O75054 1194 aa21.24■□□□□ 0.99
SDR39U1-220ENST00000556548 TROAPQ12815 778 aa21.24■□□□□ 0.99
SDR39U1-220ENST00000556548 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
SDR39U1-220ENST00000556548 TTF2Q9UNY4 1162 aaKnown RBP21.24■□□□□ 0.99
SDR39U1-220ENST00000556548 FLT1P17948 1338 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 USP17L3A6NCW0 530 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 USP17L4A6NCW7 530 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 LETM1O95202 739 aaPredicted RBP21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 ATL3Q6DD88 541 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 USP17L1Q7RTZ2 530 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 CCAR1Q8IX12 1150 aaKnown RBP21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 NUP62CLQ9H1M0 184 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 LAMB1P07942 1786 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 PICALMQ13492 652 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 STK38Q15208 465 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 CKAP2LQ8IYA6 745 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 IL17RBQ9NRM6 502 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 RTEL1Q9NZ71 1219 aa21.23■□□□□ 0.99
SDR39U1-220ENST00000556548 GAKO14976 1311 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 MYH15Q9Y2K3 1946 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 STYK1Q6J9G0 422 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 WASF1Q92558 559 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 FAM163AQ96GL9 167 aaPredicted RBP21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 GOLPH3LQ9H4A5 285 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 DEXIO95424 95 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 RCAN1P53805 252 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 SF3B2Q13435 895 aaKnown RBP21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 SF3A1Q15459 793 aaKnown RBP21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 LINC00301Q8NCQ3 95 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 PIBF1Q8WXW3 757 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 EYA3Q99504 573 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 PCDHA7Q9UN72 937 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 MTMR7Q9Y216 660 aa21.22■□□□□ 0.99
SDR39U1-220ENST00000556548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 PLCG2P16885 1265 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 RCSD1Q6JBY9 416 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 TNMDQ9H2S6 317 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 BTBD18B2RXH4 712 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 TSPY3P0CV98 308 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 TSPY8P0CW00 308 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 AKAP17AQ02040 695 aaKnown RBP21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 ANP32BQ92688 251 aaKnown RBP21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 V9GY48 417 aaPredicted RBP21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 ECM29Q5VYK3 1845 aa21.21■□□□□ 0.99
SDR39U1-220ENST00000556548 ANO1Q5XXA6 986 aa21.2■□□□□ 0.98
SDR39U1-220ENST00000556548 RGPD3A6NKT7 1758 aaPredicted RBP21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 RGPD4Q7Z3J3 1758 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 DDAH1O94760 285 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 MMP1P03956 469 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 FUT2Q10981 343 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 MAP3K11Q16584 847 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 CERS3Q8IU89 383 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 DIS3L2Q8IYB7 885 aaKnown RBP21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 CTCFLQ8NI51 663 aaPredicted RBP21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 KAT14Q9H8E8 782 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 DDX19AQ9NUU7 478 aaKnown RBP21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 POLR3EQ9NVU0 708 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 VPS54Q9P1Q0 977 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 SLX4Q8IY92 1834 aa21.19■□□□□ 0.98
SDR39U1-220ENST00000556548 SPTLC2O15270 562 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 CALM1P0DP23 149 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 CALM2P0DP24 149 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 CALM3P0DP25 149 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 RASA1P20936 1047 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 MARCKSP29966 332 aaPredicted RBP21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 CDK8P49336 464 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 SRBD1Q8N5C6 995 aaKnown RBP21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 FSIP1Q8NA03 581 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 FUCA2Q9BTY2 467 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 RBM28Q9NW13 759 aaKnown RBP21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 NAV1Q8NEY1 1877 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 ROBO3Q96MS0 1386 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 U2AF2P26368 475 aaKnown RBP eCLIP21.18■□□□□ 0.988e-10■■■□□ 14.8
SDR39U1-220ENST00000556548 BAG6P46379 1132 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 NR5A1Q13285 461 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 PKN1Q16512 942 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 CNKSR1Q969H4 720 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 RNF26Q9BY78 433 aaPredicted RBP21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 CLSTN2Q9H4D0 955 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 STX8Q9UNK0 236 aa21.18■□□□□ 0.98
SDR39U1-220ENST00000556548 PPP2R5BQ15173 497 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 SAFBQ15424 915 aaKnown RBP eCLIP21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 AOC3Q16853 763 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 TMTC3Q6ZXV5 915 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 KIAA0825Q8IV33 1275 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 OXER1Q8TDS5 423 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 USP40Q9NVE5 1235 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 A0A1B0GVL5 298 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 C21orf2O43822 256 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 DDX4Q9NQI0 724 aaKnown RBP21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 PCDHAC2Q9Y5I4 1007 aa21.17■□□□□ 0.98
SDR39U1-220ENST00000556548 ECE2O60344 883 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 YEATS4O95619 227 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 CCDC73Q6ZRK6 1079 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 PODNQ7Z5L7 613 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms