RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 NACAP1Q9BZK3 213 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 HELLSQ9NRZ9 838 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 KCNH4Q9UQ05 1017 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 A0A0D9SFI3 127 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 MPHOSPH10O00566 681 aaKnown RBP20.45■□□□□ 0.86
PSEN1-217ENST00000556533 CXCL11O14625 94 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 ASNSP08243 561 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 ABCB5Q2M3G0 1257 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 GIMAP6Q6P9H5 292 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 GADL1Q6ZQY3 521 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 R3HDMLQ9H3Y0 253 aa20.45■□□□□ 0.86
PSEN1-217ENST00000556533 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 GABPAQ06546 454 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 MCMDC2Q4G0Z9 681 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-217ENST00000556533 SKAP1Q86WV1 359 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 IFNL3Q8IZI9 196 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 ZNF280CQ8ND82 737 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 AS3MTQ9HBK9 375 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 PRDM10Q9NQV6 1147 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 ARPP21Q9UBL0 812 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-217ENST00000556533 ZBTB21Q9ULJ3 1066 aa20.44■□□□□ 0.86
PSEN1-217ENST00000556533 GSPT1P15170 499 aaKnown RBP20.43■□□□□ 0.86
PSEN1-217ENST00000556533 CWC27Q6UX04 472 aaKnown RBP20.43■□□□□ 0.86
PSEN1-217ENST00000556533 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
PSEN1-217ENST00000556533 EPB41L4AQ9HCS5 686 aaPredicted RBP20.43■□□□□ 0.86
PSEN1-217ENST00000556533 SWAP70Q9UH65 585 aa20.43■□□□□ 0.86
PSEN1-217ENST00000556533 CDK5RAP2Q96SN8 1893 aa20.43■□□□□ 0.86
PSEN1-217ENST00000556533 A0A0G2JLL6 359 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-217ENST00000556533 CDK8P49336 464 aa20.42■□□□□ 0.86
PSEN1-217ENST00000556533 CRHR2Q13324 411 aa20.42■□□□□ 0.86
PSEN1-217ENST00000556533 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-217ENST00000556533 SBK1Q52WX2 424 aa20.42■□□□□ 0.86
PSEN1-217ENST00000556533 FASTKD5Q7L8L6 764 aaKnown RBP20.42■□□□□ 0.86
PSEN1-217ENST00000556533 PRRT2Q7Z6L0 340 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-217ENST00000556533 NAPBQ9H115 298 aa20.42■□□□□ 0.86
PSEN1-217ENST00000556533 GINM1Q9NU53 330 aa20.42■□□□□ 0.86
PSEN1-217ENST00000556533 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
PSEN1-217ENST00000556533 HIP1O00291 1037 aa20.41■□□□□ 0.86
PSEN1-217ENST00000556533 PDHXO00330 501 aa20.41■□□□□ 0.86
PSEN1-217ENST00000556533 MOGSQ13724 837 aa20.41■□□□□ 0.86
PSEN1-217ENST00000556533 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
PSEN1-217ENST00000556533 TBC1D2Q9BYX2 928 aa20.41■□□□□ 0.86
PSEN1-217ENST00000556533 GPR25O00155 361 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 MYH1P12882 1939 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 MYH7P12883 1935 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 HMGCS2P54868 508 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 C16orf86Q6ZW13 317 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 ANKRD23Q86SG2 305 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 WDR18Q9BV38 432 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 MKNK2Q9HBH9 465 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 ZFYVE28Q9HCC9 887 aa20.4■□□□□ 0.86
PSEN1-217ENST00000556533 SIPA1L1O43166 1804 aa20.39■□□□□ 0.86
PSEN1-217ENST00000556533 AKR1B1P15121 316 aa20.39■□□□□ 0.85
PSEN1-217ENST00000556533 DGKZQ13574 1117 aa20.39■□□□□ 0.85
PSEN1-217ENST00000556533 MTMR2Q13614 643 aa20.39■□□□□ 0.85
PSEN1-217ENST00000556533 SEPT2Q15019 361 aa20.39■□□□□ 0.85
PSEN1-217ENST00000556533 GPAT2Q6NUI2 795 aa20.39■□□□□ 0.85
PSEN1-217ENST00000556533 ZNF589Q86UQ0 364 aaPredicted RBP20.39■□□□□ 0.85
PSEN1-217ENST00000556533 NAV1Q8NEY1 1877 aa20.39■□□□□ 0.85
PSEN1-217ENST00000556533 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
PSEN1-217ENST00000556533 ZYXQ15942 572 aaKnown RBP20.38■□□□□ 0.85
PSEN1-217ENST00000556533 ZNF296Q8WUU4 475 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-217ENST00000556533 FEZ1Q99689 392 aa20.38■□□□□ 0.85
PSEN1-217ENST00000556533 TMOD4Q9NZQ9 345 aa20.38■□□□□ 0.85
PSEN1-217ENST00000556533 TAOK2Q9UL54 1235 aa20.38■□□□□ 0.85
PSEN1-217ENST00000556533 CCDC171Q6TFL3 1326 aa20.37■□□□□ 0.85
PSEN1-217ENST00000556533 USP17L10C9JJH3 530 aa20.37■□□□□ 0.85
PSEN1-217ENST00000556533 FOXP2O15409 715 aa20.37■□□□□ 0.85
PSEN1-217ENST00000556533 GUCY1A2P33402 732 aa20.37■□□□□ 0.85
PSEN1-217ENST00000556533 BACE1P56817 501 aa20.37■□□□□ 0.85
PSEN1-217ENST00000556533 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
PSEN1-217ENST00000556533 ZCCHC17Q9NP64 241 aaKnown RBP20.37■□□□□ 0.85
PSEN1-217ENST00000556533 FKTNO75072 461 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 PRDM1O75626 825 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 SLC3A2P08195 630 aaKnown RBP20.36■□□□□ 0.85
PSEN1-217ENST00000556533 CYP2C8P10632 490 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 HSPD1P10809 573 aaKnown RBP20.36■□□□□ 0.85
PSEN1-217ENST00000556533 PPARAQ07869 468 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 TREML2Q5T2D2 321 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 TMEM179Q6ZVK1 233 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 ACER1Q8TDN7 264 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 CCDC17Q96LX7 622 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 DOCK1Q14185 1865 aa20.36■□□□□ 0.85
PSEN1-217ENST00000556533 C19orf81C9J6K1 198 aa20.35■□□□□ 0.85
PSEN1-217ENST00000556533 ATP2B2Q01814 1243 aa20.35■□□□□ 0.85
PSEN1-217ENST00000556533 CTDSPL2Q05D32 466 aa20.35■□□□□ 0.85
PSEN1-217ENST00000556533 ZNF444Q8N0Y2 327 aaPredicted RBP20.35■□□□□ 0.85
PSEN1-217ENST00000556533 AGTPBP1Q9UPW5 1226 aa20.35■□□□□ 0.85
PSEN1-217ENST00000556533 DDX60LQ5H9U9 1706 aaKnown RBP20.35■□□□□ 0.85
PSEN1-217ENST00000556533 FGAP02671 866 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 RASA1P20936 1047 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 PDE4BQ07343 736 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 ALX1Q15699 326 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 SH3D19Q5HYK7 790 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms