RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CLCN7P51798 805 aa9.04□□□□□ -0.96
PRPF39-209ENST00000556353 SFRP5Q5T4F7 317 aa9.04□□□□□ -0.96
PRPF39-209ENST00000556353 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
PRPF39-209ENST00000556353 LETMD1Q6P1Q0 360 aa9.04□□□□□ -0.96
PRPF39-209ENST00000556353 CCDC84Q86UT8 332 aaPredicted RBP9.04□□□□□ -0.96
PRPF39-209ENST00000556353 XAGE3Q8WTP9 111 aa9.04□□□□□ -0.96
PRPF39-209ENST00000556353 ASIC4Q96FT7 647 aa9.04□□□□□ -0.96
PRPF39-209ENST00000556353 KRTAP9-6A0A140TA67 174 aa9.03□□□□□ -0.96
PRPF39-209ENST00000556353 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
PRPF39-209ENST00000556353 BIN1O00499 593 aa9.03□□□□□ -0.96
PRPF39-209ENST00000556353 IKZF1Q13422 519 aa9.03□□□□□ -0.96
PRPF39-209ENST00000556353 MRPL41Q8IXM3 137 aaKnown RBP9.03□□□□□ -0.96
PRPF39-209ENST00000556353 RC3H2Q9HBD1 1191 aaKnown RBP9.03□□□□□ -0.96
PRPF39-209ENST00000556353 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
PRPF39-209ENST00000556353 F6X3S4 739 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 BPNT1O95861 308 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 RNASE1P07998 156 aaKnown RBP9.02□□□□□ -0.97
PRPF39-209ENST00000556353 LMNB2Q03252 620 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 CAMK2GQ13555 558 aaPredicted RBP9.02□□□□□ -0.97
PRPF39-209ENST00000556353 SLC6A19Q695T7 634 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 RELL1Q8IUW5 271 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 MFSD4AQ8N468 514 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 RIN3Q8TB24 985 aa9.02□□□□□ -0.97
PRPF39-209ENST00000556353 MBNL3Q9NUK0 354 aaKnown RBP9.02□□□□□ -0.97
PRPF39-209ENST00000556353 PRR33A8MZF0 331 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 ZNF865P0CJ78 1059 aaPredicted RBP9.01□□□□□ -0.97
PRPF39-209ENST00000556353 CYP7A1P22680 504 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 PWP1Q13610 501 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 SLC23A3Q6PIS1 610 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 TMEM87BQ96K49 555 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 DPH2Q9BQC3 489 aaPredicted RBP9.01□□□□□ -0.97
PRPF39-209ENST00000556353 BCL2L13Q9BXK5 485 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 ADAM30Q9UKF2 790 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 ADAMTS6Q9UKP5 1117 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 PITPNM2Q9BZ72 1349 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 CNTNAP4Q9C0A0 1308 aa9.01□□□□□ -0.97
PRPF39-209ENST00000556353 PF4P02776 101 aa9□□□□□ -0.97
PRPF39-209ENST00000556353 GBP2P32456 591 aaPredicted RBP9□□□□□ -0.97
PRPF39-209ENST00000556353 BNC2Q6ZN30 1099 aaPredicted RBP9□□□□□ -0.97
PRPF39-209ENST00000556353 COX4I2Q96KJ9 171 aa9□□□□□ -0.97
PRPF39-209ENST00000556353 TMEM74Q96NL1 305 aa9□□□□□ -0.97
PRPF39-209ENST00000556353 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
PRPF39-209ENST00000556353 CILPO75339 1184 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 PAPLNO95428 1278 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 ZP2Q05996 745 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 ZNF326Q5BKZ1 582 aaKnown RBP8.99□□□□□ -0.97
PRPF39-209ENST00000556353 CDKAL1Q5VV42 579 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 ATG4DQ86TL0 474 aaPredicted RBP8.99□□□□□ -0.97
PRPF39-209ENST00000556353 CDH24Q86UP0 819 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 MCATQ8IVS2 390 aaKnown RBP8.99□□□□□ -0.97
PRPF39-209ENST00000556353 GATAD2BQ8WXI9 593 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 ACSF2Q96CM8 615 aaPredicted RBP8.99□□□□□ -0.97
PRPF39-209ENST00000556353 RHOVQ96L33 236 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 GOLGA2P5Q9HBQ8 144 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 CAPN6Q9Y6Q1 641 aa8.99□□□□□ -0.97
PRPF39-209ENST00000556353 FAM221AA4D161 298 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 CBX7O95931 251 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 F13A1P00488 732 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 ETV3P41162 512 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 LRRN4CLQ8ND94 238 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 GIPC2Q8TF65 315 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 HSPA12BQ96MM6 686 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 KRTAP4-12Q9BQ66 201 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 CORINQ9Y5Q5 1042 aa8.98□□□□□ -0.97
PRPF39-209ENST00000556353 PLCG1P19174 1290 aa8.97□□□□□ -0.97
PRPF39-209ENST00000556353 KIR3DL1P43629 444 aa8.97□□□□□ -0.97
PRPF39-209ENST00000556353 PRDM7Q9NQW5 492 aa8.97□□□□□ -0.97
PRPF39-209ENST00000556353 MINDY4BA8MYZ0 360 aa8.96□□□□□ -0.98
PRPF39-209ENST00000556353 H3BS24 57 aa8.96□□□□□ -0.98
PRPF39-209ENST00000556353 SNAP47Q5SQN1 464 aa8.96□□□□□ -0.98
PRPF39-209ENST00000556353 SEMA3GQ9NS98 782 aa8.96□□□□□ -0.98
PRPF39-209ENST00000556353 LMCD1Q9NZU5 365 aa8.96□□□□□ -0.98
PRPF39-209ENST00000556353 YARSP54577 528 aaKnown RBP8.95□□□□□ -0.98
PRPF39-209ENST00000556353 FAM160A1Q05DH4 1040 aa8.95□□□□□ -0.98
PRPF39-209ENST00000556353 GOLM1Q8NBJ4 401 aa8.95□□□□□ -0.98
PRPF39-209ENST00000556353 ATP13A1Q9HD20 1204 aa8.95□□□□□ -0.98
PRPF39-209ENST00000556353 ST14Q9Y5Y6 855 aa8.95□□□□□ -0.98
PRPF39-209ENST00000556353 TMEM201Q5SNT2 666 aa8.94□□□□□ -0.98
PRPF39-209ENST00000556353 THAP5Q7Z6K1 395 aa8.94□□□□□ -0.98
PRPF39-209ENST00000556353 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
PRPF39-209ENST00000556353 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 TNK2Q07912 1038 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 ERMP1Q7Z2K6 904 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 DNAJB8Q8NHS0 232 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 CYB5D2Q8WUJ1 264 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 CARS2Q9HA77 564 aaKnown RBP8.93□□□□□ -0.98
PRPF39-209ENST00000556353 KBTBD4Q9NVX7 518 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 CEP131Q9UPN4 1083 aa8.93□□□□□ -0.98
PRPF39-209ENST00000556353 UPK3BL1B0FP48 263 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 UPK3BL2E5RIL1 263 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 MPP2Q14168 576 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 TMCO4Q5TGY1 634 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 OGFOD2Q6N063 350 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 FLAD1Q8NFF5 587 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 PIWIL2Q8TC59 973 aaKnown RBP8.92□□□□□ -0.98
PRPF39-209ENST00000556353 FAM168AQ92567 244 aa8.92□□□□□ -0.98
PRPF39-209ENST00000556353 PRR36Q9H6K5 1346 aa8.91□□□□□ -0.98
PRPF39-209ENST00000556353 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms