RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TMEM39BQ9GZU3 492 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 INCENPQ9NQS7 918 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 PGAP2Q9UHJ9 254 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-218ENST00000556343 TAF6LQ9Y6J9 622 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 CNTNAP1P78357 1384 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 SH2B2O14492 632 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-218ENST00000556343 DHX16O60231 1041 aaKnown RBP10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CALM1P0DP23 149 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CALM2P0DP24 149 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CALM3P0DP25 149 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CPA1P15085 419 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 ABCB5Q2M3G0 1257 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CYB5R4Q7L1T6 521 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CHST3Q7LGC8 479 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 CATIPQ7Z7H3 387 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 IGDCC4Q8TDY8 1250 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 BRF1Q92994 677 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 ZNF274Q96GC6 653 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-218ENST00000556343 ZNF341Q9BYN7 854 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 TBC1D2Q9BYX2 928 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 KAT14Q9H8E8 782 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 RRAGCQ9HB90 399 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 SLC12A7Q9Y666 1083 aa10.81□□□□□ -0.68
ACTN1-218ENST00000556343 PPP1R12BO60237 982 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-218ENST00000556343 SHMT1P34896 483 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 RCAN1P53805 252 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 MAP3K10Q02779 954 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 CPLX2Q6PUV4 134 aaKnown RBP10.8□□□□□ -0.68
ACTN1-218ENST00000556343 TMEM179Q6ZVK1 233 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 NOL8Q76FK4 1167 aaKnown RBP10.8□□□□□ -0.68
ACTN1-218ENST00000556343 KRT26Q7Z3Y9 468 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 ANKS1AQ92625 1134 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 TCEANC2Q96MN5 208 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 LRRC2Q9BYS8 371 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 AGXT2Q9BYV1 514 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 SLKQ9H2G2 1235 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-218ENST00000556343 KANSL2Q9H9L4 492 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-218ENST00000556343 TNKSO95271 1327 aa10.8□□□□□ -0.68
ACTN1-218ENST00000556343 ZNF646O15015 1829 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-218ENST00000556343 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 KLF18A0A0U1RQI7 1052 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 ANTXR2P58335 489 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 TOB2Q14106 344 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-218ENST00000556343 MIGA2Q7L4E1 593 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 USP48Q86UV5 1035 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 SGMS1Q86VZ5 419 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 LDHDQ86WU2 507 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 SLC44A5Q8NCS7 719 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 ZKSCAN3Q9BRR0 538 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 LY9Q9HBG7 655 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 STX8Q9UNK0 236 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 TACC3Q9Y6A5 838 aa10.79□□□□□ -0.68
ACTN1-218ENST00000556343 ASTN2O75129 1339 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-218ENST00000556343 POTECB2RU33 542 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 ZBTB43O43298 467 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 CTNND1O60716 968 aaKnown RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 CDKL5O76039 1030 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 DDAH1O94760 285 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 TTLL1O95922 423 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 ASNSP08243 561 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 TOP1P11387 765 aaKnown RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 AKR1B1P15121 316 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 IREB2P48200 963 aaKnown RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 EVCP57679 992 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 EVX2Q03828 476 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 APOBRQ0VD83 1088 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 ENAHQ8N8S7 591 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 TEPSINQ96N21 525 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 CWC22Q9HCG8 908 aaKnown RBP10.78□□□□□ -0.68
ACTN1-218ENST00000556343 TPCN1Q9ULQ1 816 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 SYNPO2Q9UMS6 1093 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 KIF3AQ9Y496 699 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 NAV1Q8NEY1 1877 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 UTRNP46939 3433 aa10.78□□□□□ -0.68
ACTN1-218ENST00000556343 GOLGA8BA8MQT2 603 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 SMIM22K7EJ46 135 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 CPLX1O14810 134 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 PFKFB2O60825 505 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 PDIA3P30101 505 aaKnown RBP10.77□□□□□ -0.69
ACTN1-218ENST00000556343 KIF5BP33176 963 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 CAP2P40123 477 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 GNAQP50148 359 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 METAP2P50579 478 aaKnown RBP eCLIP10.77□□□□□ -0.69
ACTN1-218ENST00000556343 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 RAB3GAP1Q15042 981 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 SEC23AQ15436 765 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 LLPHQ9BRT6 129 aaKnown RBP10.77□□□□□ -0.69
ACTN1-218ENST00000556343 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 PICK1Q9NRD5 415 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms