RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.07
NEMF-209ENST00000556074 CATSPER4Q7RTX7 472 aa8.4□□□□□ -1.07
NEMF-209ENST00000556074 UHMK1Q8TAS1 419 aaKnown RBP8.4□□□□□ -1.07
NEMF-209ENST00000556074 NAA15Q9BXJ9 866 aaKnown RBP8.4□□□□□ -1.07
NEMF-209ENST00000556074 SLC12A5Q9H2X9 1139 aa8.4□□□□□ -1.07
NEMF-209ENST00000556074 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.07
NEMF-209ENST00000556074 ATP8A2Q9NTI2 1148 aa8.4□□□□□ -1.07
NEMF-209ENST00000556074 PDRG1Q9NUG6 133 aa8.4□□□□□ -1.07
NEMF-209ENST00000556074 FAM198AQ9UFP1 575 aa8.4□□□□□ -1.07
NEMF-209ENST00000556074 C3orf80F5H4A9 247 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 CNOT4O95628 575 aaKnown RBP8.39□□□□□ -1.07
NEMF-209ENST00000556074 GJA9P57773 515 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 MPP1Q00013 466 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 CACNB2Q08289 660 aaPredicted RBP8.39□□□□□ -1.07
NEMF-209ENST00000556074 STRN3Q13033 797 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 FXNQ16595 210 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 MIGA1Q8NAN2 632 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 BARD1Q99728 777 aaKnown RBP8.39□□□□□ -1.07
NEMF-209ENST00000556074 MICAL2O94851 1124 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 ENPP1P22413 925 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
NEMF-209ENST00000556074 HSP90B2PQ58FF3 399 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 NFXL1Q6ZNB6 911 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 FAM186BQ8IYM0 893 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 OCSTAMPQ9BR26 566 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 SUDS3Q9H7L9 328 aaPredicted RBP8.39□□□□□ -1.07
NEMF-209ENST00000556074 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 MAPRE3Q9UPY8 281 aa8.39□□□□□ -1.07
NEMF-209ENST00000556074 LUC7L2Q9Y383 392 aaKnown RBP8.39□□□□□ -1.07
NEMF-209ENST00000556074 VGLL3A8MV65 326 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 MINDY4BA8MYZ0 360 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 ELL2O00472 640 aaPredicted RBP8.38□□□□□ -1.07
NEMF-209ENST00000556074 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 CTNNA1P35221 906 aaKnown RBP8.38□□□□□ -1.07
NEMF-209ENST00000556074 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
NEMF-209ENST00000556074 OTUD6AQ7L8S5 288 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 LILRB1Q8NHL6 650 aaPredicted RBP8.38□□□□□ -1.07
NEMF-209ENST00000556074 COG1Q8WTW3 980 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 TRMT1Q9NXH9 659 aaKnown RBP8.38□□□□□ -1.07
NEMF-209ENST00000556074 HOXC10Q9NYD6 342 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEMF-209ENST00000556074 ZMYM5Q9UJ78 669 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 TMEM127O75204 238 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 GCGRP47871 477 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 TNNI3KQ59H18 835 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 GALNT17Q6IS24 598 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 C16orf46Q6P387 395 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 SLC41A1Q8IVJ1 513 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 MGARPQ8TDB4 240 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 AFAP1L1Q8TED9 768 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 TMEM106CQ9BVX2 250 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
NEMF-209ENST00000556074 FRMPD2Q68DX3 1309 aaPredicted RBP8.38□□□□□ -1.07
NEMF-209ENST00000556074 EYA2O00167 538 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 CCDC175P0C221 793 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 PAX7P23759 505 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 SMC1AQ14683 1233 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 EPM2AIP1Q7L775 607 aaPredicted RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 OR8H1Q8NGG4 311 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 NSUN6Q8TEA1 469 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 FAM210AQ96ND0 272 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 POLR3CQ9BUI4 534 aaPredicted RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 TNKS2Q9H2K2 1166 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 DDX21Q9NR30 783 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEMF-209ENST00000556074 TBC1D22BQ9NU19 505 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 GTF3C4Q9UKN8 822 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 TTLL3Q9Y4R7 772 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 RTCAO00442 366 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 GJB6O95452 261 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 PRKAR2AP13861 404 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 IRS1P35568 1242 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 MECOMQ03112 1051 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 MINDY4Q4G0A6 757 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 SLC45A4Q5BKX6 768 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 ARMC4Q5T2S8 1044 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 NUGGCQ68CJ6 796 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 SLC6A19Q695T7 634 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 STON2Q8WXE9 905 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 TNIP3Q96KP6 325 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 TRIM56Q9BRZ2 755 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 ACTR10Q9NZ32 417 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 FOXN3O00409 490 aaPredicted RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 KIF1CO43896 1103 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 ALDH5A1P51649 535 aaPredicted RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 GIMAP1Q8WWP7 306 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 CRB3Q9BUF7 120 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 MRPL9Q9BYD2 267 aaKnown RBP8.37□□□□□ -1.07
NEMF-209ENST00000556074 SLC13A1Q9BZW2 595 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
NEMF-209ENST00000556074 FAM153BP0C7A2 387 aa8.36□□□□□ -1.07
NEMF-209ENST00000556074 EIF4A3P38919 411 aaKnown RBP8.36□□□□□ -1.07
NEMF-209ENST00000556074 INHBEP58166 350 aa8.36□□□□□ -1.07
NEMF-209ENST00000556074 ZNF296Q8WUU4 475 aaPredicted RBP8.36□□□□□ -1.07
NEMF-209ENST00000556074 UBP1Q9NZI7 540 aa8.36□□□□□ -1.07
NEMF-209ENST00000556074 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms