RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 FMR1Q06787 632 aaKnown RBP eCLIP16.44■□□□□ 0.22
SIX1-205ENST00000555955 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
SIX1-205ENST00000555955 TRAPPC11Q7Z392 1133 aa16.44■□□□□ 0.22
SIX1-205ENST00000555955 MAB21L3Q8N8X9 362 aa16.44■□□□□ 0.22
SIX1-205ENST00000555955 ZNF473Q8WTR7 871 aaKnown RBP16.44■□□□□ 0.22
SIX1-205ENST00000555955 NUCKS1Q9H1E3 243 aaKnown RBP16.44■□□□□ 0.22
SIX1-205ENST00000555955 SAMSN1Q9NSI8 373 aaKnown RBP16.44■□□□□ 0.22
SIX1-205ENST00000555955 KCNB1Q14721 858 aa16.43■□□□□ 0.22
SIX1-205ENST00000555955 METTL16Q86W50 562 aaKnown RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 LMBR1Q8WVP7 490 aa16.43■□□□□ 0.22
SIX1-205ENST00000555955 SRGAP2O75044 1071 aa16.43■□□□□ 0.22
SIX1-205ENST00000555955 SNUPNO95149 360 aaKnown RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 TTMPQ5BVD1 217 aa16.43■□□□□ 0.22
SIX1-205ENST00000555955 KIAA1328Q86T90 577 aa16.43■□□□□ 0.22
SIX1-205ENST00000555955 RUFY1Q96T51 708 aa16.43■□□□□ 0.22
SIX1-205ENST00000555955 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 PA2G4Q9UQ80 394 aaKnown RBP16.43■□□□□ 0.22
SIX1-205ENST00000555955 TRAF1Q13077 416 aa16.42■□□□□ 0.22
SIX1-205ENST00000555955 RRP36Q96EU6 259 aaKnown RBP16.42■□□□□ 0.22
SIX1-205ENST00000555955 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
SIX1-205ENST00000555955 CASP14P31944 242 aa16.42■□□□□ 0.22
SIX1-205ENST00000555955 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
SIX1-205ENST00000555955 DRP2Q13474 957 aa16.42■□□□□ 0.22
SIX1-205ENST00000555955 KCTD16Q68DU8 428 aa16.42■□□□□ 0.22
SIX1-205ENST00000555955 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
SIX1-205ENST00000555955 SH2D3CQ8N5H7 860 aa16.42■□□□□ 0.22
SIX1-205ENST00000555955 AENQ8WTP8 325 aaKnown RBP16.42■□□□□ 0.22
SIX1-205ENST00000555955 SAR1BQ9Y6B6 198 aa16.42■□□□□ 0.22
SIX1-205ENST00000555955 A0A1B0GTH6 734 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 MFAP3LO75121 409 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 GUCY1A3Q02108 690 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 CDCA2Q69YH5 1023 aaPredicted RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 CCDC121Q6ZUS5 278 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 C8orf76Q96K31 380 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 FAM210AQ96ND0 272 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 CCT8L2Q96SF2 557 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 HAUS2Q9NVX0 235 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 GUCA1BQ9UMX6 200 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 RPS6KL1Q9Y6S9 549 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 JCADQ9P266 1359 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 SEC24CP53992 1094 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 ENOX1Q8TC92 643 aaKnown RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 ACTR5Q9H9F9 607 aaPredicted RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 BATF3Q9NR55 127 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 HPSEQ9Y251 543 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 EPB41P11171 864 aaKnown RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
SIX1-205ENST00000555955 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
SIX1-205ENST00000555955 TTC36A6NLP5 189 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 PECAM1P16284 738 aaPredicted RBP16.4■□□□□ 0.22
SIX1-205ENST00000555955 CDC25CP30307 473 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 ACCSLQ4AC99 568 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 TTLL7Q6ZT98 887 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 BRAPQ7Z569 592 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
SIX1-205ENST00000555955 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
SIX1-205ENST00000555955 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
SIX1-205ENST00000555955 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 PXDNLA1KZ92 1463 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 SBNO1A3KN83 1393 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 FOXN1O15353 648 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
SIX1-205ENST00000555955 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
SIX1-205ENST00000555955 RPS6KA3P51812 740 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 SLC39A14Q15043 492 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 NLRP14Q86W24 1093 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 CAGE1Q8TC20 777 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 GJB4Q9NTQ9 266 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
SIX1-205ENST00000555955 PLEKHG1Q9ULL1 1385 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 ATP1A1P05023 1023 aaKnown RBP16.39■□□□□ 0.21
SIX1-205ENST00000555955 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
SIX1-205ENST00000555955 PPARDQ03181 441 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 NNTQ13423 1086 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 TMTC1Q8IUR5 882 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 HOOK2Q96ED9 719 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 TRIM10Q9UDY6 481 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 PPP1R37O75864 691 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 FXR1P51114 621 aaKnown RBP eCLIP16.39■□□□□ 0.21
SIX1-205ENST00000555955 CKAP4Q07065 602 aaKnown RBP16.39■□□□□ 0.21
SIX1-205ENST00000555955 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
SIX1-205ENST00000555955 PTGISQ16647 500 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 ZNF827Q17R98 1081 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
SIX1-205ENST00000555955 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
SIX1-205ENST00000555955 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms