RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 NKX2-3Q8TAU0 364 aa18.69■□□□□ 0.58
SNX6-205ENST00000555648 FEZ1Q99689 392 aa18.69■□□□□ 0.58
SNX6-205ENST00000555648 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
SNX6-205ENST00000555648 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
SNX6-205ENST00000555648 CABP5Q9NP86 173 aa18.69■□□□□ 0.58
SNX6-205ENST00000555648 MAST2Q6P0Q8 1798 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 GH2P01242 217 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 FLT3LGP49771 235 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX6-205ENST00000555648 EHD4Q9H223 541 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 BOLA2Q9H3K6 86 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 DOCK1Q14185 1865 aa18.68■□□□□ 0.58
SNX6-205ENST00000555648 ADCY3O60266 1144 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 RAB3GAP1Q15042 981 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 MTFR1Q15390 333 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
SNX6-205ENST00000555648 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 CCAR1Q8IX12 1150 aaKnown RBP18.67■□□□□ 0.58
SNX6-205ENST00000555648 RNF208Q9H0X6 261 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 PAG1Q9NWQ8 432 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 GABRQQ9UN88 632 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
SNX6-205ENST00000555648 CCL5P13501 91 aa18.66■□□□□ 0.58
SNX6-205ENST00000555648 USP17L2Q6R6M4 530 aa18.66■□□□□ 0.58
SNX6-205ENST00000555648 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
SNX6-205ENST00000555648 MCM9Q9NXL9 1143 aa18.66■□□□□ 0.58
SNX6-205ENST00000555648 ATP5JP18859 108 aa18.65■□□□□ 0.58
SNX6-205ENST00000555648 JAG1P78504 1218 aa18.65■□□□□ 0.58
SNX6-205ENST00000555648 ABCB5Q2M3G0 1257 aa18.65■□□□□ 0.58
SNX6-205ENST00000555648 PXYLP1Q8TE99 480 aa18.65■□□□□ 0.58
SNX6-205ENST00000555648 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
SNX6-205ENST00000555648 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
SNX6-205ENST00000555648 HOXA7P31268 230 aaPredicted RBP18.64■□□□□ 0.57
SNX6-205ENST00000555648 IRF5Q13568 498 aa18.64■□□□□ 0.57
SNX6-205ENST00000555648 SHROOM1Q2M3G4 852 aaPredicted RBP18.64■□□□□ 0.57
SNX6-205ENST00000555648 TATDN1Q6P1N9 297 aa18.64■□□□□ 0.57
SNX6-205ENST00000555648 AMOTL1Q8IY63 956 aa18.64■□□□□ 0.57
SNX6-205ENST00000555648 GTF3C2Q8WUA4 911 aaPredicted RBP18.64■□□□□ 0.57
SNX6-205ENST00000555648 EDC3Q96F86 508 aaKnown RBP18.64■□□□□ 0.57
SNX6-205ENST00000555648 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
SNX6-205ENST00000555648 CWC22Q9HCG8 908 aaKnown RBP18.64■□□□□ 0.57
SNX6-205ENST00000555648 MPHOSPH10O00566 681 aaKnown RBP18.63■□□□□ 0.57
SNX6-205ENST00000555648 GJB1P08034 283 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 ELNP15502 786 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 USP14P54578 494 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 ZYXQ15942 572 aaKnown RBP18.63■□□□□ 0.57
SNX6-205ENST00000555648 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 GPRC5AQ8NFJ5 357 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 P2RX7Q99572 595 aaKnown RBP18.63■□□□□ 0.57
SNX6-205ENST00000555648 HAUS7Q99871 368 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 PDE4DIPQ5VU43 2346 aa18.63■□□□□ 0.57
SNX6-205ENST00000555648 INHAP05111 366 aa18.62■□□□□ 0.57
SNX6-205ENST00000555648 PLCD1P51178 756 aa18.62■□□□□ 0.57
SNX6-205ENST00000555648 HERVK_113P62684 666 aa18.62■□□□□ 0.57
SNX6-205ENST00000555648 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
SNX6-205ENST00000555648 SDR42E1Q8WUS8 393 aa18.62■□□□□ 0.57
SNX6-205ENST00000555648 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
SNX6-205ENST00000555648 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
SNX6-205ENST00000555648 SMARCA5O60264 1052 aaPredicted RBP18.61■□□□□ 0.57
SNX6-205ENST00000555648 MBD4O95243 580 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 ADD2P35612 726 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 GJA8P48165 433 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 PAGR1Q9BTK6 254 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 UNC93B1Q9H1C4 597 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 DCP1AQ9NPI6 582 aaPredicted RBP18.61■□□□□ 0.57
SNX6-205ENST00000555648 EMILIN3Q9NT22 766 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 MORF4L1Q9UBU8 362 aa18.61■□□□□ 0.57
SNX6-205ENST00000555648 ZSWIM8A7E2V4 1837 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 TCRBV5S4A2TA0A5A2 114 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 SHMT1P34896 483 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 U2AF1L4Q8WU68 220 aaKnown RBP18.6■□□□□ 0.57
SNX6-205ENST00000555648 ATP8A2Q9NTI2 1148 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 ECHDC1Q9NTX5 307 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 SWAP70Q9UH65 585 aa18.6■□□□□ 0.57
SNX6-205ENST00000555648 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
SNX6-205ENST00000555648 MAPK4P31152 587 aa18.59■□□□□ 0.57
SNX6-205ENST00000555648 DPF3Q92784 378 aa18.59■□□□□ 0.57
SNX6-205ENST00000555648 NUDT12Q9BQG2 462 aa18.59■□□□□ 0.57
SNX6-205ENST00000555648 KIAA1683Q9H0B3 1180 aa18.59■□□□□ 0.57
SNX6-205ENST00000555648 SLC34A2O95436 690 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 CAPN2P17655 700 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 CCNA1P78396 465 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 UBE3CQ15386 1083 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 SOCS4Q8WXH5 440 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 C12orf42Q96LP6 360 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 HTATIP2Q9BUP3 242 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.56
SNX6-205ENST00000555648 FARP2O94887 1054 aaPredicted RBP18.57■□□□□ 0.56
SNX6-205ENST00000555648 SGPL1O95470 568 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 HMGCRP04035 888 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms