RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 SHISA4Q96DD7 197 aa21.38■■□□□ 1.01
GABRB3-209ENST00000555632 FAM163AQ96GL9 167 aaPredicted RBP21.38■■□□□ 1.01
GABRB3-209ENST00000555632 DAGLAQ9Y4D2 1042 aa21.38■■□□□ 1.01
GABRB3-209ENST00000555632 CCDC196A0A1B0GTZ2 297 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 H0YIN7 160 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 ME1P48163 572 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 FUT2Q10981 343 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 NUP62CLQ9H1M0 184 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 DBNDD1Q9H9R9 158 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 STK32BQ9NY57 414 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 FLT1P17948 1338 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 LETM1O95202 739 aaPredicted RBP21.37■■□□□ 1.01
GABRB3-209ENST00000555632 TRIM22Q8IYM9 498 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 PCDHA7Q9UN72 937 aa21.37■■□□□ 1.01
GABRB3-209ENST00000555632 BAZ2BQ9UIF8 2168 aaKnown RBP21.36■■□□□ 1.01
GABRB3-209ENST00000555632 USP17L3A6NCW0 530 aa21.36■■□□□ 1.01
GABRB3-209ENST00000555632 USP17L4A6NCW7 530 aa21.36■■□□□ 1.01
GABRB3-209ENST00000555632 USP17L1Q7RTZ2 530 aa21.36■■□□□ 1.01
GABRB3-209ENST00000555632 CCAR1Q8IX12 1150 aaKnown RBP21.36■■□□□ 1.01
GABRB3-209ENST00000555632 CKAP2LQ8IYA6 745 aa21.36■■□□□ 1.01
GABRB3-209ENST00000555632 ROBO3Q96MS0 1386 aa21.36■■□□□ 1.01
GABRB3-209ENST00000555632 U2AF2P26368 475 aaKnown RBP eCLIP21.35■■□□□ 1.01
GABRB3-209ENST00000555632 POLR3EQ9NVU0 708 aa21.35■■□□□ 1.01
GABRB3-209ENST00000555632 BTBD18B2RXH4 712 aa21.35■■□□□ 1.01
GABRB3-209ENST00000555632 DEXIO95424 95 aa21.35■■□□□ 1.01
GABRB3-209ENST00000555632 SCNN1DP51172 638 aa21.35■■□□□ 1.01
GABRB3-209ENST00000555632 TRIM29Q14134 588 aa21.35■■□□□ 1.01
GABRB3-209ENST00000555632 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.35■■□□□ 1.01
GABRB3-209ENST00000555632 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
GABRB3-209ENST00000555632 PKN1Q16512 942 aa21.34■■□□□ 1.01
GABRB3-209ENST00000555632 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
GABRB3-209ENST00000555632 TTF2Q9UNY4 1162 aaKnown RBP21.34■■□□□ 1.01
GABRB3-209ENST00000555632 MMP1P03956 469 aa21.34■■□□□ 1.01
GABRB3-209ENST00000555632 SNW1Q13573 536 aaKnown RBP21.34■■□□□ 1.01
GABRB3-209ENST00000555632 STK38Q15208 465 aa21.34■■□□□ 1.01
GABRB3-209ENST00000555632 ANO1Q5XXA6 986 aa21.34■■□□□ 1.01
GABRB3-209ENST00000555632 TMX4Q9H1E5 349 aaPredicted RBP21.34■■□□□ 1.01
GABRB3-209ENST00000555632 TNMDQ9H2S6 317 aa21.34■■□□□ 1.01
GABRB3-209ENST00000555632 MYH6P13533 1939 aa21.33■■□□□ 1.01
GABRB3-209ENST00000555632 DDX60LQ5H9U9 1706 aaKnown RBP21.33■■□□□ 1.01
GABRB3-209ENST00000555632 GNL2Q13823 731 aaKnown RBP21.33■■□□□ 1.01
GABRB3-209ENST00000555632 STYK1Q6J9G0 422 aa21.33■■□□□ 1.01
GABRB3-209ENST00000555632 WASF1Q92558 559 aa21.33■■□□□ 1.01
GABRB3-209ENST00000555632 RNF26Q9BY78 433 aaPredicted RBP21.33■■□□□ 1.01
GABRB3-209ENST00000555632 CLSTN2Q9H4D0 955 aa21.33■■□□□ 1.01
GABRB3-209ENST00000555632 DDX19AQ9NUU7 478 aaKnown RBP21.33■■□□□ 1.01
GABRB3-209ENST00000555632 V9GY48 417 aaPredicted RBP21.33■■□□□ 1.01
GABRB3-209ENST00000555632 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1.01
GABRB3-209ENST00000555632 DDAH1O94760 285 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 RASA1P20936 1047 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 NR5A1Q13285 461 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 SF3A1Q15459 793 aaKnown RBP21.32■■□□□ 1
GABRB3-209ENST00000555632 MAP3K11Q16584 847 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 SLF2Q8IX21 1173 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 AMOTL1Q8IY63 956 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 DIS3L2Q8IYB7 885 aaKnown RBP21.32■■□□□ 1
GABRB3-209ENST00000555632 SRBD1Q8N5C6 995 aaKnown RBP21.32■■□□□ 1
GABRB3-209ENST00000555632 OXER1Q8TDS5 423 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 G3V3G9 751 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 SPTLC2O15270 562 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 PICALMQ13492 652 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 PPP2R5BQ15173 497 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 DCAF8Q5TAQ9 597 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 RTN4Q9NQC3 1192 aaKnown RBP21.32■■□□□ 1
GABRB3-209ENST00000555632 VPS54Q9P1Q0 977 aa21.32■■□□□ 1
GABRB3-209ENST00000555632 YEATS4O95619 227 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 PLCG2P16885 1265 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 MARCKSP29966 332 aaPredicted RBP21.31■■□□□ 1
GABRB3-209ENST00000555632 TMTC3Q6ZXV5 915 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 ENGASEQ8NFI3 743 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 PPP1R9BQ96SB3 815 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 DDX4Q9NQI0 724 aaKnown RBP21.31■■□□□ 1
GABRB3-209ENST00000555632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.31■■□□□ 1
GABRB3-209ENST00000555632 A0A1B0GVL5 298 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 TSPY3P0CV98 308 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 TSPY8P0CW00 308 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 CALM1P0DP23 149 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 CALM2P0DP24 149 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 CALM3P0DP25 149 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 CDK8P49336 464 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 ADALQ6DHV7 355 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 CERS3Q8IU89 383 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 FSIP1Q8NA03 581 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 MAP3K14Q99558 947 aa21.31■■□□□ 1
GABRB3-209ENST00000555632 MYH1P12882 1939 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 SCN9AQ15858 1988 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 WDHD1O75717 1129 aaPredicted RBP21.3■■□□□ 1
GABRB3-209ENST00000555632 VEGFAP15692 232 aaPredicted RBP21.3■■□□□ 1
GABRB3-209ENST00000555632 CCDC173Q0VFZ6 552 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 RBM43Q6ZSC3 357 aaKnown RBP21.3■■□□□ 1
GABRB3-209ENST00000555632 C16orf86Q6ZW13 317 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 NOSTRINQ8IVI9 506 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 ZNF444Q8N0Y2 327 aaPredicted RBP21.3■■□□□ 1
GABRB3-209ENST00000555632 KCNG4Q8TDN1 519 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 EYA3Q99504 573 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 RBM28Q9NW13 759 aaKnown RBP21.3■■□□□ 1
GABRB3-209ENST00000555632 PCDHAC2Q9Y5I4 1007 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 SNED1Q8TER0 1413 aa21.3■■□□□ 1
GABRB3-209ENST00000555632 PTPAQ15257 358 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms