RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 LRFN4Q6PJG9 635 aa7.38□□□□□ -1.23
SCFD1-216ENST00000555550 MFSD4AQ8N468 514 aa7.38□□□□□ -1.23
SCFD1-216ENST00000555550 UBE2FQ969M7 185 aa7.38□□□□□ -1.23
SCFD1-216ENST00000555550 CEP44Q9C0F1 390 aa7.38□□□□□ -1.23
SCFD1-216ENST00000555550 ST14Q9Y5Y6 855 aa7.38□□□□□ -1.23
SCFD1-216ENST00000555550 GSTT1P30711 240 aa7.37□□□□□ -1.23
SCFD1-216ENST00000555550 DSC3Q14574 896 aa7.37□□□□□ -1.23
SCFD1-216ENST00000555550 LRRC14Q15048 493 aa7.37□□□□□ -1.23
SCFD1-216ENST00000555550 OSBPL7Q9BZF2 842 aa7.37□□□□□ -1.23
SCFD1-216ENST00000555550 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-216ENST00000555550 SLAMF8Q9P0V8 285 aa7.37□□□□□ -1.23
SCFD1-216ENST00000555550 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
SCFD1-216ENST00000555550 PRRG2O14669 202 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 ERVFC1P60507 584 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 ENOX2Q16206 610 aaKnown RBP7.36□□□□□ -1.23
SCFD1-216ENST00000555550 ATG14Q6ZNE5 492 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 TTLL10Q6ZVT0 673 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 TTC6Q86TZ1 520 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 XAGE3Q8WTP9 111 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 ALPK1Q96QP1 1244 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-216ENST00000555550 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
SCFD1-216ENST00000555550 NCANO14594 1321 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 SOWAHDA6NJG2 315 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 B8ZZF3 427 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 CDK8P49336 464 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 RALGPS1Q5JS13 557 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-216ENST00000555550 ABHD4Q8TB40 342 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 SETDB2Q96T68 719 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 CYP8B1Q9UNU6 501 aa7.35□□□□□ -1.23
SCFD1-216ENST00000555550 DNAJC25-GNG10A0A024R161 153 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 ETV2O00321 342 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-216ENST00000555550 CELA3AP09093 270 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 BUD31P41223 144 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-216ENST00000555550 KCNA10Q16322 511 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 PCNX4Q63HM2 1172 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 LETMD1Q6P1Q0 360 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 KCNN1Q92952 543 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 DCTN4Q9UJW0 460 aa7.34□□□□□ -1.23
SCFD1-216ENST00000555550 WASH4PA8MWX3 477 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 TREHO43280 583 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 HK2P52789 917 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 ETF1P62495 437 aaKnown RBP7.33□□□□□ -1.24
SCFD1-216ENST00000555550 C22orf34Q6ZV56 151 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 HDXQ7Z353 690 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 CDH24Q86UP0 819 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 AMIGO3Q86WK7 504 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 MFSD2AQ8NA29 543 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 EPB41L4BQ9H329 900 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 CD320Q9NPF0 282 aa7.33□□□□□ -1.24
SCFD1-216ENST00000555550 INHBBP09529 407 aa7.32□□□□□ -1.24
SCFD1-216ENST00000555550 MAPK8P45983 427 aa7.32□□□□□ -1.24
SCFD1-216ENST00000555550 TNK2Q07912 1038 aa7.32□□□□□ -1.24
SCFD1-216ENST00000555550 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
SCFD1-216ENST00000555550 SMG5Q9UPR3 1016 aaKnown RBP7.32□□□□□ -1.24
SCFD1-216ENST00000555550 TCAF2A6NFQ2 919 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 RAC2P15153 192 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 MAPK1P28482 360 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 PRAMEF13Q5VWM6 474 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 THAP5Q7Z6K1 395 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 HID1Q8IV36 788 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 CCDC120Q96HB5 630 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 ADAMTS10Q9H324 1103 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 PPM1HQ9ULR3 514 aa7.31□□□□□ -1.24
SCFD1-216ENST00000555550 ESR1P03372 595 aa7.3□□□□□ -1.24
SCFD1-216ENST00000555550 TRHRP34981 398 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-216ENST00000555550 SCARA3Q6AZY7 606 aa7.3□□□□□ -1.24
SCFD1-216ENST00000555550 CIAPIN1Q6FI81 312 aa7.3□□□□□ -1.24
SCFD1-216ENST00000555550 MYLIPQ8WY64 445 aa7.3□□□□□ -1.24
SCFD1-216ENST00000555550 SRCIN1Q9C0H9 1055 aa7.3□□□□□ -1.24
SCFD1-216ENST00000555550 GRK4P32298 578 aa7.29□□□□□ -1.24
SCFD1-216ENST00000555550 CAP2P40123 477 aa7.29□□□□□ -1.24
SCFD1-216ENST00000555550 WIPI1Q5MNZ9 446 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-216ENST00000555550 NUAK1O60285 661 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 CST3P01034 146 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-216ENST00000555550 MED14OSP0DP75 135 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 CREG2Q8IUH2 290 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 GAL3ST3Q96A11 431 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 DPH2Q9BQC3 489 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-216ENST00000555550 IRF2BPLQ9H1B7 796 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 TMEM59LQ9UK28 342 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 SNCAIPQ9Y6H5 919 aa7.28□□□□□ -1.24
SCFD1-216ENST00000555550 CYP7A1P22680 504 aa7.27□□□□□ -1.25
SCFD1-216ENST00000555550 GLDCP23378 1020 aa7.27□□□□□ -1.25
SCFD1-216ENST00000555550 CTSWP56202 376 aa7.27□□□□□ -1.25
SCFD1-216ENST00000555550 ZNF746Q6NUN9 644 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-216ENST00000555550 C20orf173Q96LM9 149 aa7.27□□□□□ -1.25
SCFD1-216ENST00000555550 C19orf44Q9H6X5 657 aa7.27□□□□□ -1.25
SCFD1-216ENST00000555550 HPXP02790 462 aa7.26□□□□□ -1.25
SCFD1-216ENST00000555550 LINC00310P59036 64 aa7.26□□□□□ -1.25
SCFD1-216ENST00000555550 RAPGEFL1Q9UHV5 662 aa7.26□□□□□ -1.25
SCFD1-216ENST00000555550 USP17L7P0C7H9 530 aa7.25□□□□□ -1.25
SCFD1-216ENST00000555550 HOXA5P20719 270 aa7.25□□□□□ -1.25
SCFD1-216ENST00000555550 TPP2P29144 1249 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-216ENST00000555550 KIR3DL1P43629 444 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms