RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 PDGFDQ9GZP0 370 aaPredicted RBP27.33■■□□□ 1.97
STRN3-207ENST00000555358 TRMT1Q9NXH9 659 aaKnown RBP27.33■■□□□ 1.97
STRN3-207ENST00000555358 AXDND1Q5T1B0 1012 aaPredicted RBP27.32■■□□□ 1.96
STRN3-207ENST00000555358 OGFRQ9NZT2 677 aa27.32■■□□□ 1.96
STRN3-207ENST00000555358 TACC3Q9Y6A5 838 aa27.32■■□□□ 1.96
STRN3-207ENST00000555358 TDO2P48775 406 aa27.32■■□□□ 1.96
STRN3-207ENST00000555358 ATP6V0A2Q9Y487 856 aa27.32■■□□□ 1.96
STRN3-207ENST00000555358 BAZ2AQ9UIF9 1905 aaKnown RBP27.31■■□□□ 1.96
STRN3-207ENST00000555358 C6orf229H3BNL8 230 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 KIF23Q02241 960 aaPredicted RBP27.31■■□□□ 1.96
STRN3-207ENST00000555358 RAB11FIP4Q86YS3 637 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 XPO4Q9C0E2 1151 aaKnown RBP27.31■■□□□ 1.96
STRN3-207ENST00000555358 CD209Q9NNX6 404 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 MAST2Q6P0Q8 1798 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 ZBTB22O15209 634 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 ZNF202O95125 648 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 NLRP12P59046 1061 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 GRIK5Q16478 980 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 NACAP1Q9BZK3 213 aa27.31■■□□□ 1.96
STRN3-207ENST00000555358 ZNF215Q9UL58 517 aaPredicted RBP27.31■■□□□ 1.96
STRN3-207ENST00000555358 NCAPHQ15003 741 aa27.3■■□□□ 1.96
STRN3-207ENST00000555358 ANO1Q5XXA6 986 aa27.3■■□□□ 1.96
STRN3-207ENST00000555358 SLC3A2P08195 630 aaKnown RBP27.29■■□□□ 1.96
STRN3-207ENST00000555358 CYB5R4Q7L1T6 521 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 IFNKQ9P0W0 207 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 GOLGB1Q14789 3259 aaKnown RBP27.29■■□□□ 1.96
STRN3-207ENST00000555358 QSER1Q2KHR3 1735 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 B4E1Z4 1266 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 CMA1P23946 247 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 TRDNQ13061 729 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 ARMCX5Q6P1M9 558 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 TMC4Q7Z404 712 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 WDR66Q8TBY9 1149 aa27.29■■□□□ 1.96
STRN3-207ENST00000555358 AATFQ9NY61 560 aaKnown RBP eCLIP27.29■■□□□ 1.96
STRN3-207ENST00000555358 MROH7-TTC4A0A0A0MT08 1334 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 CPLX1O14810 134 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 PFKFB1P16118 471 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 ZRSR1Q15695 479 aaKnown RBP27.28■■□□□ 1.96
STRN3-207ENST00000555358 E4F1Q66K89 784 aaPredicted RBP27.28■■□□□ 1.96
STRN3-207ENST00000555358 STK11IPQ8N1F8 1099 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 RGS22Q8NE09 1264 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 MASTLQ96GX5 879 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 DDX41Q9UJV9 622 aaKnown RBP27.28■■□□□ 1.96
STRN3-207ENST00000555358 SMIM22K7EJ46 135 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 SF3B2Q13435 895 aaKnown RBP27.28■■□□□ 1.96
STRN3-207ENST00000555358 SYNE3Q6ZMZ3 975 aa27.28■■□□□ 1.96
STRN3-207ENST00000555358 ZNF622Q969S3 477 aaKnown RBP eCLIP27.28■■□□□ 1.96
STRN3-207ENST00000555358 BIN1O00499 593 aa27.27■■□□□ 1.96
STRN3-207ENST00000555358 ALDH1B1P30837 517 aa27.27■■□□□ 1.96
STRN3-207ENST00000555358 BAG6P46379 1132 aa27.27■■□□□ 1.96
STRN3-207ENST00000555358 CCDC150Q8NCX0 1101 aa27.27■■□□□ 1.96
STRN3-207ENST00000555358 ZHX1Q9UKY1 873 aaPredicted RBP27.27■■□□□ 1.96
STRN3-207ENST00000555358 WDHD1O75717 1129 aaPredicted RBP27.26■■□□□ 1.96
STRN3-207ENST00000555358 SMC2O95347 1197 aa27.26■■□□□ 1.96
STRN3-207ENST00000555358 IL1R1P14778 569 aa27.26■■□□□ 1.96
STRN3-207ENST00000555358 DZIP1Q86YF9 867 aaKnown RBP27.26■■□□□ 1.96
STRN3-207ENST00000555358 KIF18AQ8NI77 898 aa27.26■■□□□ 1.96
STRN3-207ENST00000555358 TIAM2Q8IVF5 1701 aa27.26■■□□□ 1.96
STRN3-207ENST00000555358 DUOX1Q9NRD9 1551 aa27.26■■□□□ 1.95
STRN3-207ENST00000555358 KIF2AO00139 706 aaPredicted RBP27.26■■□□□ 1.95
STRN3-207ENST00000555358 RIMBP2O15034 1052 aa27.26■■□□□ 1.95
STRN3-207ENST00000555358 LDHBP07195 334 aaKnown RBP27.26■■□□□ 1.95
STRN3-207ENST00000555358 SPTY2D1Q68D10 685 aaPredicted RBP27.26■■□□□ 1.95
STRN3-207ENST00000555358 TMC6Q7Z403 805 aa27.26■■□□□ 1.95
STRN3-207ENST00000555358 C2CD5Q86YS7 1000 aa27.26■■□□□ 1.95
STRN3-207ENST00000555358 ERO1AQ96HE7 468 aa27.25■■□□□ 1.95
STRN3-207ENST00000555358 SLC39A14Q15043 492 aa27.25■■□□□ 1.95
STRN3-207ENST00000555358 AKNAD1Q5T1N1 836 aa27.25■■□□□ 1.95
STRN3-207ENST00000555358 KCNJ6P48051 423 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 MINDY4BA8MYZ0 360 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 PPARAQ07869 468 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 DIXDC1Q155Q3 683 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 PPP1R13BQ96KQ4 1090 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 TIGD1Q96MW7 591 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 HSD3B7Q9H2F3 369 aa27.24■■□□□ 1.95
STRN3-207ENST00000555358 KIAA1551Q9HCM1 1747 aa27.23■■□□□ 1.95
STRN3-207ENST00000555358 ECM29Q5VYK3 1845 aa27.23■■□□□ 1.95
STRN3-207ENST00000555358 CYP2D7A0A087X1C5 515 aa27.23■■□□□ 1.95
STRN3-207ENST00000555358 CHRNA5P30532 468 aa27.23■■□□□ 1.95
STRN3-207ENST00000555358 KMT5BQ4FZB7 885 aa27.23■■□□□ 1.95
STRN3-207ENST00000555358 ZNF397Q8NF99 534 aaPredicted RBP27.23■■□□□ 1.95
STRN3-207ENST00000555358 MORC2Q9Y6X9 1032 aaPredicted RBP27.23■■□□□ 1.95
STRN3-207ENST00000555358 PSDA5PKW4 1024 aaPredicted RBP27.22■■□□□ 1.95
STRN3-207ENST00000555358 IKBKBO14920 756 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 MFSD6Q6ZSS7 791 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 AIFM3Q96NN9 605 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.22■■□□□ 1.95
STRN3-207ENST00000555358 HPSEQ9Y251 543 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 V9GYY5 206 aaPredicted RBP27.22■■□□□ 1.95
STRN3-207ENST00000555358 MYH2Q9UKX2 1941 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 SFPQP23246 707 aaKnown RBP eCLIP27.22■■□□□ 1.953e-6■■□□□ 13.4
STRN3-207ENST00000555358 MARCKSP29966 332 aaPredicted RBP27.22■■□□□ 1.95
STRN3-207ENST00000555358 TPM4P67936 248 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 STAG1Q8WVM7 1258 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 ZSWIM5Q9P217 1185 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 TUBE1Q9UJT0 475 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 SLX4Q8IY92 1834 aa27.22■■□□□ 1.95
STRN3-207ENST00000555358 H0YIN7 160 aa27.21■■□□□ 1.95
STRN3-207ENST00000555358 SLU7O95391 586 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms