RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
TUBB3-207ENST00000554927 PLXNB2O15031 1838 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 CNGA1P29973 690 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 HOXA7P31268 230 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-207ENST00000554927 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 ERVK-24P63145 666 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 PORCNQ9H237 461 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 RBPJLQ9UBG7 517 aa16.32■□□□□ 0.2
TUBB3-207ENST00000554927 NOB1Q9ULX3 412 aaKnown RBP16.32■□□□□ 0.2
TUBB3-207ENST00000554927 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-207ENST00000554927 ASNSP08243 561 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
TUBB3-207ENST00000554927 Q3C1V9 767 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 MORN1Q5T089 497 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 USP6NLQ92738 828 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
TUBB3-207ENST00000554927 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
TUBB3-207ENST00000554927 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-207ENST00000554927 A0A1B0GUL7 405 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 ZBTB22O15209 634 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 GLRX3O76003 335 aaKnown RBP16.3■□□□□ 0.2
TUBB3-207ENST00000554927 MAP2K5Q13163 448 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 GORABQ5T7V8 394 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 TBC1D9Q6ZT07 1266 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-207ENST00000554927 ZNF384Q8TF68 577 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-207ENST00000554927 NEUROD6Q96NK8 337 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-207ENST00000554927 ATP11BQ9Y2G3 1177 aa16.3■□□□□ 0.2
TUBB3-207ENST00000554927 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
TUBB3-207ENST00000554927 GDF11O95390 407 aa16.29■□□□□ 0.2
TUBB3-207ENST00000554927 RTP1P59025 263 aa16.29■□□□□ 0.2
TUBB3-207ENST00000554927 SH3RF3Q8TEJ3 882 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-207ENST00000554927 MYLIPQ8WY64 445 aa16.29■□□□□ 0.2
TUBB3-207ENST00000554927 NSUN4Q96CB9 384 aaKnown RBP16.29■□□□□ 0.2
TUBB3-207ENST00000554927 EDC3Q96F86 508 aaKnown RBP16.29■□□□□ 0.2
TUBB3-207ENST00000554927 SEMA6BQ9H3T3 888 aa16.29■□□□□ 0.2
TUBB3-207ENST00000554927 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
TUBB3-207ENST00000554927 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
TUBB3-207ENST00000554927 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 TFCP2Q12800 502 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 SHHQ15465 462 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 SPATA5Q8NB90 893 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 DHX36Q9H2U1 1008 aaKnown RBP16.28■□□□□ 0.2
TUBB3-207ENST00000554927 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 LRP2BPQ9P2M1 347 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 ATAD5Q96QE3 1844 aa16.28■□□□□ 0.2
TUBB3-207ENST00000554927 DNM1LO00429 736 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 MSCO60682 206 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-207ENST00000554927 FOSL2P15408 326 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
TUBB3-207ENST00000554927 CCNA1P78396 465 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 JAG1P78504 1218 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 SHROOM1Q2M3G4 852 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-207ENST00000554927 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 LPAR1Q92633 364 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
TUBB3-207ENST00000554927 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
TUBB3-207ENST00000554927 BAG3O95817 575 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
TUBB3-207ENST00000554927 C9orf50Q5SZB4 431 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 FEZ1Q99689 392 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.19
TUBB3-207ENST00000554927 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 IVNS1ABPQ9Y6Y0 642 aa16.26■□□□□ 0.19
TUBB3-207ENST00000554927 GNAI3P08754 354 aa16.25■□□□□ 0.19
TUBB3-207ENST00000554927 CYP2C19P33261 490 aa16.25■□□□□ 0.19
TUBB3-207ENST00000554927 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-207ENST00000554927 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-207ENST00000554927 TGFBRAP1Q8WUH2 860 aa16.25■□□□□ 0.19
TUBB3-207ENST00000554927 BADQ92934 168 aa16.25■□□□□ 0.19
TUBB3-207ENST00000554927 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
TUBB3-207ENST00000554927 RABGAP1Q9Y3P9 1069 aa16.25■□□□□ 0.19
TUBB3-207ENST00000554927 SLC15A5A6NIM6 579 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 PLCG2P16885 1265 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
TUBB3-207ENST00000554927 ARRDC4Q8NCT1 418 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 TTYH1Q9H313 450 aaPredicted RBP16.24■□□□□ 0.19
TUBB3-207ENST00000554927 DNAJC18Q9H819 358 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 GINM1Q9NU53 330 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
TUBB3-207ENST00000554927 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
TUBB3-207ENST00000554927 LAMA2P24043 3122 aaKnown RBP16.23■□□□□ 0.19
TUBB3-207ENST00000554927 MAST2Q6P0Q8 1798 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L15C9J2P7 530 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms