RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PDHXO00330 501 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 BCRP11274 1271 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 PPATQ06203 517 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 CHRNDQ07001 517 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
SRP54-205ENST00000554803 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 DIS3LQ8TF46 1054 aaKnown RBP13.14□□□□□ -0.31
SRP54-205ENST00000554803 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
SRP54-205ENST00000554803 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
SRP54-205ENST00000554803 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
SRP54-205ENST00000554803 ZKSCAN5Q9Y2L8 839 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 COL2A1P02458 1487 aaPredicted RBP13.14□□□□□ -0.31
SRP54-205ENST00000554803 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 SNAP23O00161 211 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 SGSM2O43147 1006 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
SRP54-205ENST00000554803 TPM3P06753 285 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 ELNP15502 786 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 COL9A1P20849 921 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 ITGA6P23229 1130 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 ANKLE1Q8NAG6 615 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
SRP54-205ENST00000554803 SIL1Q9H173 461 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 JAG2Q9Y219 1238 aa13.13□□□□□ -0.31
SRP54-205ENST00000554803 CDH23Q9H251 3354 aa13.12□□□□□ -0.31
SRP54-205ENST00000554803 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
SRP54-205ENST00000554803 SYN1P17600 705 aa13.12□□□□□ -0.31
SRP54-205ENST00000554803 IRF5Q13568 498 aa13.12□□□□□ -0.31
SRP54-205ENST00000554803 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
SRP54-205ENST00000554803 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
SRP54-205ENST00000554803 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
SRP54-205ENST00000554803 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
SRP54-205ENST00000554803 KCNH4Q9UQ05 1017 aa13.12□□□□□ -0.31
SRP54-205ENST00000554803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
SRP54-205ENST00000554803 TAF5LO75529 589 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 FLT3LGP49771 235 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 MOGSQ13724 837 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 KCNB2Q92953 911 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 PARK7Q99497 189 aaKnown RBP13.11□□□□□ -0.31
SRP54-205ENST00000554803 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
SRP54-205ENST00000554803 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
SRP54-205ENST00000554803 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 MFSD14BQ5SR56 506 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
SRP54-205ENST00000554803 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
SRP54-205ENST00000554803 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
SRP54-205ENST00000554803 CRKP46108 304 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 UBE2HP62256 183 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
SRP54-205ENST00000554803 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 ATG9AQ7Z3C6 839 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
SRP54-205ENST00000554803 NBPF3Q9H094 633 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 SNRKQ9NRH2 765 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 PHIPQ8WWQ0 1821 aa13.09□□□□□ -0.31
SRP54-205ENST00000554803 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.31
SRP54-205ENST00000554803 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
SRP54-205ENST00000554803 CYP2C8P10632 490 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
SRP54-205ENST00000554803 PDCP20941 246 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 INPP5BP32019 993 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 OS9Q13438 667 aaPredicted RBP13.08□□□□□ -0.32
SRP54-205ENST00000554803 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 DCAF15Q66K64 600 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 CLASRPQ8N2M8 674 aaKnown RBP13.08□□□□□ -0.32
SRP54-205ENST00000554803 TTC14Q96N46 770 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 ALDH8A1Q9H2A2 487 aaPredicted RBP13.08□□□□□ -0.32
SRP54-205ENST00000554803 IL1RAPL2Q9NP60 686 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 PLXNB2O15031 1838 aa13.08□□□□□ -0.32
SRP54-205ENST00000554803 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 FRMPD3Q5JV73 1810 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 EYA2O00167 538 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 PSMA5P28066 241 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 CACNB3P54284 484 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms