RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 DDX46Q7L014 1031 aaKnown RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 NBPF5PQ86XG9 351 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 C7orf43Q8WVR3 580 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 KCNB2Q92953 911 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 FAM84BQ96KN1 310 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 SETDB2Q96T68 719 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 HMG20BQ9P0W2 317 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 MAST3O60307 1309 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 ATP9BO43861 1147 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 VARSP26640 1264 aaKnown RBP7.12□□□□□ -1.27
ATXN3-230ENST00000554673 CHRNA5P30532 468 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 GYG1P46976 350 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 GPSM2P81274 684 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 CCDC57Q2TAC2 916 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 CCDC102BQ68D86 513 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 STOX1Q6ZVD7 989 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 FBXO33Q7Z6M2 555 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 ERC1Q8IUD2 1116 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 CLASRPQ8N2M8 674 aaKnown RBP7.12□□□□□ -1.27
ATXN3-230ENST00000554673 TMEM151AQ8N4L1 468 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 OSBP2Q969R2 916 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 PCDHGC3Q9UN70 934 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 IQSEC3Q9UPP2 1182 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-230ENST00000554673 NAV1Q8NEY1 1877 aa7.12□□□□□ -1.27
ATXN3-230ENST00000554673 GOLIM4O00461 696 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 GLRX3O76003 335 aaKnown RBP7.11□□□□□ -1.27
ATXN3-230ENST00000554673 SRGNP10124 158 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 CPA1P15085 419 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 DDIT3P35638 169 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 RPS8P62241 208 aaKnown RBP7.11□□□□□ -1.27
ATXN3-230ENST00000554673 OS9Q13438 667 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-230ENST00000554673 ADCK5Q3MIX3 580 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 METTL24Q5JXM2 366 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 ZMYM1Q5SVZ6 1142 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 TMEM164Q5U3C3 297 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 CNBD1Q8NA66 436 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 EPS8L1Q8TE68 723 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 LRRN4Q8WUT4 740 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
ATXN3-230ENST00000554673 BSDC1Q9NW68 430 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-230ENST00000554673 TFCP2L1Q9NZI6 479 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 POLLQ9UGP5 575 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 ZNF652Q9Y2D9 606 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 MYH1P12882 1939 aa7.11□□□□□ -1.27
ATXN3-230ENST00000554673 RPAP1Q9BWH6 1393 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 RAD50Q92878 1312 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 TCHHQ07283 1943 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 GREB1LQ9C091 1923 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 DICER1Q9UPY3 1922 aaKnown RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 GDF11O95390 407 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 IFIT2P09913 472 aaKnown RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 CDK11BP21127 795 aaKnown RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 KCNH2Q12809 1159 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 GRAPQ13588 217 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 PTPRNQ16849 979 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 CCDC152Q4G0S7 254 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 HSP90AB4PQ58FF6 505 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 KBTBD3Q8NAB2 608 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 GRAPLQ8TC17 118 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 RILPL2Q969X0 211 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 ZNF512BQ96KM6 892 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 NEUROD6Q96NK8 337 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 C22orf23Q9BZE7 217 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 PUS7LQ9H0K6 701 aaKnown RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 EPB41L4AQ9HCS5 686 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-230ENST00000554673 KCNQ5Q9NR82 932 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 EVA1BQ9NVM1 165 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 CEP126Q9P2H0 1117 aa7.1□□□□□ -1.27
ATXN3-230ENST00000554673 RFX7Q2KHR2 1363 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 PPFIA3O75145 1194 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-230ENST00000554673 LARGE1O95461 756 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 ZNF16P17020 682 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-230ENST00000554673 CTHP32929 405 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 GSK3AP49840 483 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 NECTIN1Q15223 517 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 TTLL5Q6EMB2 1281 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 CWC27Q6UX04 472 aaKnown RBP7.09□□□□□ -1.27
ATXN3-230ENST00000554673 CERS5Q8N5B7 392 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 STK32AQ8WU08 396 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 TTC14Q96N46 770 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 DNAJC2Q99543 621 aaKnown RBP7.09□□□□□ -1.27
ATXN3-230ENST00000554673 MXD3Q9BW11 206 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 CNNM1Q9NRU3 951 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 JAG2Q9Y219 1238 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 SNX14Q9Y5W7 946 aa7.09□□□□□ -1.27
ATXN3-230ENST00000554673 CCDC171Q6TFL3 1326 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 MROH5Q6ZUA9 1318 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 MYH15Q9Y2K3 1946 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 BMP2P12643 396 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 HSPA4P34932 840 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 ADD2P35612 726 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 RASSF7Q02833 373 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms