RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SMC6Q96SB8 1091 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 DNAJC7Q99615 494 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 MCM9Q9NXL9 1143 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GABBR1Q9UBS5 961 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 PCDHB13Q9Y5F0 798 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 IRF1P10914 325 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ERFP50548 548 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 CEP120Q8N960 986 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 BRF1Q92994 677 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 PDE4BQ07343 736 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GBP7Q8N8V2 638 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 BTN2A2Q8WVV5 523 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 C8orf76Q96K31 380 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 PI4K2BG5E9Z4 385 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ATP2A3Q93084 1043 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 CYTH2Q99418 400 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SNRNP200O75643 2136 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ARID1AO14497 2285 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 MBD3O95983 291 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 HPDP32754 393 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GYG1P46976 350 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 NLRP11P59045 1033 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF397Q8NF99 534 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 MBD4O95243 580 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 KDELC2Q7Z4H8 507 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TAGAPQ8N103 731 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC7Q96M83 1385 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 NMRK2Q9NPI5 230 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PICK1Q9NRD5 415 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 SNAP23O00161 211 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ZSCAN9O15535 394 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ADCK5Q3MIX3 580 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DPF3Q92784 378 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 NVLO15381 856 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ALFQ53S48 1182 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DPP8Q6V1X1 898 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TTC8Q8TAM2 541 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 IFT74Q96LB3 600 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MMS19Q96T76 1030 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 IGFLR1Q9H665 355 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 USP40Q9NVE5 1235 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PDCP20941 246 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DYNLL1P63167 89 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 NMIQ13287 307 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TTC19Q6DKK2 380 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ITPRIPL1Q6GPH6 555 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 NFATC2IPQ8NCF5 419 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC110Q8TBZ0 833 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ASZ1Q8WWH4 475 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TXNDC16Q9P2K2 825 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DACH1Q9UI36 760 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TPRP12270 2363 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 E2F8A0AVK6 867 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PTPN14Q15678 1187 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 Q6ZUG5 572 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 THEMISQ8N1K5 641 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF507Q8TCN5 953 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DNAAF4Q8WXU2 420 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 YEATS4O95619 227 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GEMIN8Q9NWZ8 242 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ORC3Q9UBD5 711 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GCOM1H8Y6P7 765 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MYZAPP0CAP1 466 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 AKIRIN2Q53H80 203 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TPH2Q8IWU9 490 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CACTINQ8WUQ7 758 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 QTRT2Q9H974 415 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MKRN1Q9UHC7 482 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GOLGA6L9A6NEM1 432 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 M0QZ92 97 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF853P0CG23 659 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 POLA2Q14181 598 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MAP9Q49MG5 647 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 UBA7P41226 1012 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 AOPEPQ8N6M6 819 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GSTA1P08263 222 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GSTA2P09210 222 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC159P0C7I6 412 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TXKP42681 527 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CYP2J2P51589 502 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 NME8Q8N427 588 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ARHGEF1Q92888 912 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 BACH2Q9BYV9 841 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 LGR6Q9HBX8 967 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ARHGAP42A6NI28 874 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PSMC5P62195 406 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 SCN4BQ8IWT1 228 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 RASGRP4Q8TDF6 673 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 SARS2Q9NP81 518 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 RNF181Q9P0P0 153 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CEP131Q9UPN4 1083 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 RSPH10B2B2RC85 870 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 APOA4P06727 396 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 RSPH10BP0C881 870 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TRAPPC3LQ5T215 181 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 VN1R5Q7Z5H4 357 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC33Q8N5R6 958 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms