RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 HOXA7P31268 230 aaPredicted RBP27.18■■□□□ 1.94
GABRB3-206ENST00000554556 CCDC8Q9H0W5 538 aaPredicted RBP27.18■■□□□ 1.94
GABRB3-206ENST00000554556 PIH1D3Q9NQM4 214 aaKnown RBP27.18■■□□□ 1.94
GABRB3-206ENST00000554556 MORF4L1Q9UBU8 362 aa27.18■■□□□ 1.94
GABRB3-206ENST00000554556 USP17L10C9JJH3 530 aa27.17■■□□□ 1.94
GABRB3-206ENST00000554556 CEP290O15078 2479 aa27.16■■□□□ 1.94
GABRB3-206ENST00000554556 IDH1O75874 414 aaKnown RBP27.16■■□□□ 1.94
GABRB3-206ENST00000554556 HMGCRP04035 888 aa27.16■■□□□ 1.94
GABRB3-206ENST00000554556 EAF2Q96CJ1 260 aaPredicted RBP27.16■■□□□ 1.94
GABRB3-206ENST00000554556 CRISPLD2Q9H0B8 497 aa27.16■■□□□ 1.94
GABRB3-206ENST00000554556 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.16■■□□□ 1.94
GABRB3-206ENST00000554556 DNAJC18Q9H819 358 aa27.16■■□□□ 1.94
GABRB3-206ENST00000554556 SAP30BPQ9UHR5 308 aaKnown RBP27.16■■□□□ 1.94
GABRB3-206ENST00000554556 GJD2Q9UKL4 321 aa27.16■■□□□ 1.94
GABRB3-206ENST00000554556 GDF11O95390 407 aa27.15■■□□□ 1.94
GABRB3-206ENST00000554556 DYNLL1P63167 89 aaKnown RBP27.15■■□□□ 1.94
GABRB3-206ENST00000554556 TMED8Q6PL24 325 aaPredicted RBP27.15■■□□□ 1.94
GABRB3-206ENST00000554556 P2RX7Q99572 595 aaKnown RBP27.15■■□□□ 1.94
GABRB3-206ENST00000554556 ZBTB21Q9ULJ3 1066 aa27.15■■□□□ 1.94
GABRB3-206ENST00000554556 MYH1P12882 1939 aa27.15■■□□□ 1.94
GABRB3-206ENST00000554556 EVI5O60447 810 aa27.14■■□□□ 1.94
GABRB3-206ENST00000554556 USP5P45974 858 aa27.14■■□□□ 1.94
GABRB3-206ENST00000554556 ERC1Q8IUD2 1116 aa27.14■■□□□ 1.94
GABRB3-206ENST00000554556 GPRC5AQ8NFJ5 357 aa27.14■■□□□ 1.94
GABRB3-206ENST00000554556 HMX1Q9NP08 348 aaPredicted RBP27.14■■□□□ 1.94
GABRB3-206ENST00000554556 TLR7Q9NYK1 1049 aaKnown RBP27.14■■□□□ 1.94
GABRB3-206ENST00000554556 RBM27Q9P2N5 1060 aaKnown RBP27.14■■□□□ 1.94
GABRB3-206ENST00000554556 RLBP1P12271 317 aa27.13■■□□□ 1.93
GABRB3-206ENST00000554556 JAG1P78504 1218 aa27.13■■□□□ 1.93
GABRB3-206ENST00000554556 MAP3K12Q12852 859 aa27.13■■□□□ 1.93
GABRB3-206ENST00000554556 GTF3C2Q8WUA4 911 aaPredicted RBP27.13■■□□□ 1.93
GABRB3-206ENST00000554556 RPTORQ8N122 1335 aa27.13■■□□□ 1.93
GABRB3-206ENST00000554556 HERVK_113P62684 666 aa27.12■■□□□ 1.93
GABRB3-206ENST00000554556 USP17L2Q6R6M4 530 aa27.12■■□□□ 1.93
GABRB3-206ENST00000554556 NECAB2Q7Z6G3 386 aa27.12■■□□□ 1.93
GABRB3-206ENST00000554556 MAGEB6Q8N7X4 407 aa27.12■■□□□ 1.93
GABRB3-206ENST00000554556 ANKLE1Q8NAG6 615 aa27.12■■□□□ 1.93
GABRB3-206ENST00000554556 CEP85Q6P2H3 762 aa27.11■■□□□ 1.93
GABRB3-206ENST00000554556 CCAR1Q8IX12 1150 aaKnown RBP27.11■■□□□ 1.93
GABRB3-206ENST00000554556 PAWRQ96IZ0 340 aaKnown RBP27.11■■□□□ 1.93
GABRB3-206ENST00000554556 NUDT12Q9BQG2 462 aa27.11■■□□□ 1.93
GABRB3-206ENST00000554556 HSP90AB4PQ58FF6 505 aa27.1■■□□□ 1.93
GABRB3-206ENST00000554556 TTC6Q86TZ1 520 aa27.1■■□□□ 1.93
GABRB3-206ENST00000554556 MIGA1Q8NAN2 632 aa27.1■■□□□ 1.93
GABRB3-206ENST00000554556 SOCS4Q8WXH5 440 aa27.1■■□□□ 1.93
GABRB3-206ENST00000554556 GH2P01242 217 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 CYP2B6P20813 491 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 MAPK4P31152 587 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 PDE3AQ14432 1141 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 AACSQ86V21 672 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 TRMT44Q8IYL2 757 aaKnown RBP27.09■■□□□ 1.93
GABRB3-206ENST00000554556 SERPINB13Q9UIV8 391 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 TRIOBPQ9H2D6 2365 aa27.09■■□□□ 1.93
GABRB3-206ENST00000554556 XRCC5P13010 732 aaKnown RBP27.08■■□□□ 1.93
GABRB3-206ENST00000554556 SHROOM1Q2M3G4 852 aaPredicted RBP27.08■■□□□ 1.93
GABRB3-206ENST00000554556 TATDN1Q6P1N9 297 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 EHD4Q9H223 541 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 TXNRD2Q9NNW7 524 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 EMILIN3Q9NT22 766 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 RBPJLQ9UBG7 517 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 EXOC6BQ9Y2D4 811 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 PLXNB2O15031 1838 aa27.08■■□□□ 1.93
GABRB3-206ENST00000554556 FEZ1Q99689 392 aa27.07■■□□□ 1.92
GABRB3-206ENST00000554556 ANTXR1Q9H6X2 564 aa27.07■■□□□ 1.92
GABRB3-206ENST00000554556 MS4A1P11836 297 aa27.06■■□□□ 1.92
GABRB3-206ENST00000554556 ERVK-9P63128 1117 aa27.06■■□□□ 1.92
GABRB3-206ENST00000554556 ERVK-24P63145 666 aa27.06■■□□□ 1.92
GABRB3-206ENST00000554556 TTF1Q15361 905 aaPredicted RBP27.06■■□□□ 1.92
GABRB3-206ENST00000554556 TRIB2Q92519 343 aa27.06■■□□□ 1.92
GABRB3-206ENST00000554556 PRO3102Q9H379 93 aa27.06■■□□□ 1.92
GABRB3-206ENST00000554556 NDUFB9Q9Y6M9 179 aa27.06■■□□□ 1.92
GABRB3-206ENST00000554556 USP14P54578 494 aa27.05■■□□□ 1.92
GABRB3-206ENST00000554556 TRIM32Q13049 653 aa27.05■■□□□ 1.92
GABRB3-206ENST00000554556 CERKLQ49MI3 558 aaPredicted RBP27.05■■□□□ 1.92
GABRB3-206ENST00000554556 C12orf42Q96LP6 360 aa27.05■■□□□ 1.92
GABRB3-206ENST00000554556 PAGR1Q9BTK6 254 aa27.05■■□□□ 1.92
GABRB3-206ENST00000554556 NBPF3Q9H094 633 aa27.05■■□□□ 1.92
GABRB3-206ENST00000554556 CWC22Q9HCG8 908 aaKnown RBP27.05■■□□□ 1.92
GABRB3-206ENST00000554556 CABP5Q9NP86 173 aa27.05■■□□□ 1.92
GABRB3-206ENST00000554556 A0A1W2PPC1 479 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L15C9J2P7 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L13C9JLJ4 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L11C9JVI0 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L18D6R9N7 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L22D6RA61 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L17D6RBQ6 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L19D6RCP7 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L20D6RJB6 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 USP17L24Q0WX57 530 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 Q3C1V9 767 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 MIER1Q8N108 512 aa27.04■■□□□ 1.92
GABRB3-206ENST00000554556 PEX10O60683 326 aa27.03■■□□□ 1.92
GABRB3-206ENST00000554556 RGS2P41220 211 aa27.03■■□□□ 1.92
GABRB3-206ENST00000554556 RAB3GAP1Q15042 981 aa27.03■■□□□ 1.92
GABRB3-206ENST00000554556 ABCB5Q2M3G0 1257 aa27.03■■□□□ 1.92
GABRB3-206ENST00000554556 PLEKHH3Q7Z736 793 aa27.03■■□□□ 1.92
GABRB3-206ENST00000554556 DIS3LQ8TF46 1054 aaKnown RBP27.03■■□□□ 1.92
GABRB3-206ENST00000554556 RABGAP1Q9Y3P9 1069 aa27.03■■□□□ 1.92
GABRB3-206ENST00000554556 MAGEB6P1A0A0J9YX57 407 aa27.02■■□□□ 1.92
GABRB3-206ENST00000554556 POLR3DP05423 398 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms