RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 MEIS3Q99687 375 aa10.54□□□□□ -0.72
HNRNPC-212ENST00000554539 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
HNRNPC-212ENST00000554539 PALD1Q9ULE6 856 aa10.54□□□□□ -0.72
HNRNPC-212ENST00000554539 NOB1Q9ULX3 412 aaKnown RBP10.54□□□□□ -0.72
HNRNPC-212ENST00000554539 COL6A3P12111 3177 aa10.54□□□□□ -0.72
HNRNPC-212ENST00000554539 ANP32CO43423 234 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 LDHCP07864 332 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 CAPN2P17655 700 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 CYP2C19P33261 490 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 RGS2P41220 211 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 ERVK-24P63145 666 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 MORN1Q5T089 497 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 GJC2Q5T442 439 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 CRACR2BQ8N4Y2 399 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 SPATA5Q8NB90 893 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 USP6NLQ92738 828 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 SEMA6BQ9H3T3 888 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 DNAJC18Q9H819 358 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 SMC4Q9NTJ3 1288 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 LRP2BPQ9P2M1 347 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 RAPGEFL1Q9UHV5 662 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 ATP11BQ9Y2G3 1177 aa10.53□□□□□ -0.72
HNRNPC-212ENST00000554539 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 CNMDO75829 334 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 RTP1P59025 263 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 DYNLL1P63167 89 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 ADGRA1Q86SQ6 560 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 TRPV1Q8NER1 839 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 NPLOC4Q8TAT6 608 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 EDC3Q96F86 508 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 WDR18Q9BV38 432 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 TRIM34Q9BYJ4 488 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 COPRSQ9NQ92 184 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 PI4KBQ9UBF8 816 aa10.52□□□□□ -0.73
HNRNPC-212ENST00000554539 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 MAPK4P31152 587 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 MCAMP43121 646 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 GSTO1P78417 241 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 MAFAQ8NHW3 353 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 BADQ92934 168 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 FERMT2Q96AC1 680 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 PRKAG2Q9UGJ0 569 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 LAMA3Q16787 3333 aa10.51□□□□□ -0.73
HNRNPC-212ENST00000554539 GH2P01242 217 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 ASNSP08243 561 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 ATP2B2Q01814 1243 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 NAA16Q6N069 864 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 APBA2Q99767 749 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 TTYH1Q9H313 450 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 BTBD7Q9P203 1132 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 DDX20Q9UHI6 824 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 HERC5Q9UII4 1024 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 ZBTB21Q9ULJ3 1066 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 TNNQ9UQP3 1299 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
HNRNPC-212ENST00000554539 ATAD5Q96QE3 1844 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 C19orf81C9J6K1 198 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 NPM3O75607 178 aaKnown RBP10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 TRIM60Q495X7 471 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 FAM109BQ6ICB4 259 aaPredicted RBP10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L2Q6R6M4 530 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 ACER1Q8TDN7 264 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 PPM1EQ8WY54 764 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 FEZ1Q99689 392 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 TBC1D2Q9BYX2 928 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 PRDM6Q9NQX0 595 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 LOC285556D6RIA3 1793 aa10.49□□□□□ -0.73
HNRNPC-212ENST00000554539 PTPREP23469 700 aa10.48□□□□□ -0.73
HNRNPC-212ENST00000554539 SLC39A5Q6ZMH5 540 aa10.48□□□□□ -0.73
HNRNPC-212ENST00000554539 FOXP4Q8IVH2 680 aaPredicted RBP10.48□□□□□ -0.73
HNRNPC-212ENST00000554539 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
HNRNPC-212ENST00000554539 MIGA1Q8NAN2 632 aa10.48□□□□□ -0.73
HNRNPC-212ENST00000554539 FLT1P17948 1338 aa10.48□□□□□ -0.73
HNRNPC-212ENST00000554539 PNMA6EA0A0J9YXQ4 647 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
HNRNPC-212ENST00000554539 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms