RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 BACE1P56817 501 aa10.54□□□□□ -0.72
ACTN1-213ENST00000554508 AAMPQ13685 434 aa10.54□□□□□ -0.72
ACTN1-213ENST00000554508 DDX60LQ5H9U9 1706 aaKnown RBP10.54□□□□□ -0.72
ACTN1-213ENST00000554508 PDE4DIPQ5VU43 2346 aa10.54□□□□□ -0.72
ACTN1-213ENST00000554508 ARMC5Q96C12 935 aa10.54□□□□□ -0.72
ACTN1-213ENST00000554508 EDC3Q96F86 508 aaKnown RBP10.54□□□□□ -0.72
ACTN1-213ENST00000554508 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-213ENST00000554508 ZBTB21Q9ULJ3 1066 aa10.54□□□□□ -0.72
ACTN1-213ENST00000554508 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
ACTN1-213ENST00000554508 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 GDF11O95390 407 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-213ENST00000554508 CENPBP07199 599 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-213ENST00000554508 OSBPP22059 807 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 GCLCP48506 637 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-213ENST00000554508 PLCD1P51178 756 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 HMGCS2P54868 508 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 CERKLQ49MI3 558 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-213ENST00000554508 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 TREML2Q5T2D2 321 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-213ENST00000554508 TRIM47Q96LD4 638 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 ARHGAP39Q9C0H5 1083 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 ATP8A2Q9NTI2 1148 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 MCM9Q9NXL9 1143 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 TMOD4Q9NZQ9 345 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 SRRDQ9UH36 339 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 SUPT16HQ9Y5B9 1047 aaKnown RBP10.53□□□□□ -0.72
ACTN1-213ENST00000554508 PTCH2Q9Y6C5 1203 aa10.53□□□□□ -0.72
ACTN1-213ENST00000554508 CTGFP29279 349 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-213ENST00000554508 FCGRTP55899 365 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 JAG1P78504 1218 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 LCORLQ8N3X6 602 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 CABP5Q9NP86 173 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-213ENST00000554508 TTC41PQ6P2S7 1318 aa10.52□□□□□ -0.73
ACTN1-213ENST00000554508 ERC2O15083 957 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 MBD4O95243 580 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 GH2P01242 217 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 SHMT1P34896 483 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 USP14P54578 494 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 GABPAQ06546 454 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 MTMR2Q13614 643 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 FAM110CQ1W6H9 321 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 ABCB5Q2M3G0 1257 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 LRRFIP1Q32MZ4 808 aaKnown RBP10.51□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 RAET1EQ8TD07 263 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 SDR42E1Q8WUS8 393 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 DDRGK1Q96HY6 314 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 ZNF333Q96JL9 665 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 ZBTB47Q9UFB7 747 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-213ENST00000554508 SWAP70Q9UH65 585 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 MYPNQ86TC9 1320 aa10.51□□□□□ -0.73
ACTN1-213ENST00000554508 ZFYP08048 801 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-213ENST00000554508 IRX3P78415 501 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-213ENST00000554508 ANKRD13CQ8N6S4 541 aa10.5□□□□□ -0.73
ACTN1-213ENST00000554508 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-213ENST00000554508 GCC1Q96CN9 775 aa10.5□□□□□ -0.73
ACTN1-213ENST00000554508 ASCC2Q9H1I8 757 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-213ENST00000554508 CENPFP49454 3210 aa10.5□□□□□ -0.73
ACTN1-213ENST00000554508 HTTP42858 3142 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 RNF113AO15541 343 aaKnown RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 PRKAB2O43741 272 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 GLRX3O76003 335 aaKnown RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 HDAC1Q13547 482 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 SHROOM1Q2M3G4 852 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 SLFNL1Q499Z3 407 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 C12orf60Q5U649 245 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 COA7Q96BR5 231 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 C12orf42Q96LP6 360 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 P2RX7Q99572 595 aaKnown RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 PUS7LQ9H0K6 701 aaKnown RBP10.49□□□□□ -0.73
ACTN1-213ENST00000554508 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 MORF4L1Q9UBU8 362 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 SLC4A4Q9Y6R1 1079 aa10.49□□□□□ -0.73
ACTN1-213ENST00000554508 POTEFA5A3E0 1075 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L15C9J2P7 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L13C9JLJ4 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L12C9JPN9 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L11C9JVI0 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L21D6R901 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L18D6R9N7 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L22D6RA61 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L17D6RBQ6 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L19D6RCP7 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 USP17L20D6RJB6 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
ACTN1-213ENST00000554508 TNPO2O14787 897 aaKnown RBP10.48□□□□□ -0.73
ACTN1-213ENST00000554508 GRK4P32298 578 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 UBXN2AP68543 259 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms