RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 BMP2KLQ5H9B9 411 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 SARM1Q6SZW1 724 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 LRRC8AQ8IWT6 810 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 CCHCR1Q8TD31 782 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 AFAP1L1Q8TED9 768 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ACTR5Q9H9F9 607 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 DKK3Q9UBP4 350 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 BZW2Q9Y6E2 419 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 GPR75-ASB3A0A0A6YYF3 556 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 MYO1FO00160 1098 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 KDM1AO60341 852 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 KIAA0754O94854 1291 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 PARP1P09874 1014 aaKnown RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 LINGO3P0C6S8 592 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 TCF7P36402 384 aaPredicted RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 TMEM62Q0P6H9 643 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 EIF4A2Q14240 407 aaKnown RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 SPDYCQ5MJ68 293 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 THOC7Q6I9Y2 204 aaKnown RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 NCCRP1Q6ZVX7 275 aaPredicted RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 LUZP1Q86V48 1076 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 WHAMMQ8TF30 809 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 LEO1Q8WVC0 666 aaPredicted RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 DDX12PQ92771 950 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 CLIC6Q96NY7 704 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 SLC39A3Q9BRY0 314 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 BHMT2Q9H2M3 363 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 RABEP2Q9H5N1 569 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 RPAP3Q9H6T3 665 aaPredicted RBP9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 PDE11AQ9HCR9 933 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 ZBTB40Q9NUA8 1239 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 RAB21Q9UL25 225 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 ASB3Q9Y575 518 aa9.65□□□□□ -0.87
HNRNPC-211ENST00000554455 LRRC7Q96NW7 1537 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 TCHHQ07283 1943 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 ATP7BP35670 1465 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 YTHDC2Q9H6S0 1430 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 TRIM64CA6NLI5 447 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 BIN1O00499 593 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 VIMP08670 466 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CSE1LP55060 971 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CCZ1BP86790 482 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CCZ1P86791 482 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 NUCB1Q02818 461 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 PKP1Q13835 747 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 UBE2Q1Q7Z7E8 422 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 SESTD1Q86VW0 696 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CEP57L1Q8IYX8 460 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 SYCP3Q8IZU3 236 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 MOV10L1Q9BXT6 1211 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 CAPS2Q9BXY5 557 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 GBP3Q9H0R5 595 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 ZNHIT6Q9NWK9 470 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 UBAP1Q9NZ09 502 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 ZMAT5Q9UDW3 170 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 HOOK1Q9UJC3 728 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 ARHGEF40Q8TER5 1519 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 RICTORQ6R327 1708 aa9.64□□□□□ -0.87
HNRNPC-211ENST00000554455 FRMD3A2A2Y4 597 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 PALM3A6NDB9 673 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 USP27XA6NNY8 438 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 TTI1O43156 1089 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 CCDC192P0DO97 292 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 TROVE2P10155 538 aaKnown RBP eCLIP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 EVCP57679 992 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 BEND6Q5SZJ8 279 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 GGT6Q6P531 493 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 DZIP1Q86YF9 867 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 ITPRIPQ8IWB1 547 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SLC15A3Q8IY34 581 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 ZNF280CQ8ND82 737 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 LRRN4CLQ8ND94 238 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 UHMK1Q8TAS1 419 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 TSR2Q969E8 191 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 OSBPL10Q9BXB5 764 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 YIPF3Q9GZM5 350 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 MRPL46Q9H2W6 279 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 MKS1Q9NXB0 559 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 WDR35Q9P2L0 1181 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 GOLGA6L7A0A1B0GV03 622 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 GOLGA6L4A6NEF3 574 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 BOLA2-SMG1P6H3BVE0 249 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 PRPF6O94906 941 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 ABL1P00519 1130 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 GSDMDP57764 484 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms