RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CLCN6P51797 869 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 SLC9C2Q5TAH2 1124 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 MIGA1Q8NAN2 632 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 HAUS7Q99871 368 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 PAG1Q9NWQ8 432 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 PTPN22Q9Y2R2 807 aa12.62□□□□□ -0.39
PTCD2P1-201ENST00000554393 MAGEB6P1A0A0J9YX57 407 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 TCRBV5S4A2TA0A5A2 114 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 ASNSP08243 561 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 USP5P45974 858 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 KIF22Q14807 665 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 CRACR2BQ8N4Y2 399 aaPredicted RBP12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 PROCA1Q8NCQ7 364 aaPredicted RBP12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 ZNF280CQ8ND82 737 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 EHD4Q9H223 541 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 AS3MTQ9HBK9 375 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 PALD1Q9ULE6 856 aa12.61□□□□□ -0.39
PTCD2P1-201ENST00000554393 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 PRMT2P55345 433 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 WDR18Q9BV38 432 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 CRNKL1Q9BZJ0 848 aaKnown RBP12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 BAZ2AQ9UIF9 1905 aaKnown RBP12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 KIAA0100Q14667 2235 aaKnown RBP12.6□□□□□ -0.39
PTCD2P1-201ENST00000554393 ADD2P35612 726 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 CAP1Q01518 475 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 SLC17A8Q8NDX2 589 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 ARMC5Q96C12 935 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 SERPINB13Q9UIV8 391 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
PTCD2P1-201ENST00000554393 MAP3K13O43283 966 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 SMARCA5O60264 1052 aaPredicted RBP12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 BCRP11274 1271 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 SPP2Q13103 211 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 PABPC4Q13310 644 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 AAMPQ13685 434 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 ZSCAN25Q6NSZ9 544 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 ZBTB21Q9ULJ3 1066 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
PTCD2P1-201ENST00000554393 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
PTCD2P1-201ENST00000554393 CYP2C8P10632 490 aa12.57□□□□□ -0.4
PTCD2P1-201ENST00000554393 BACE1P56817 501 aa12.57□□□□□ -0.4
PTCD2P1-201ENST00000554393 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
PTCD2P1-201ENST00000554393 CENPFP49454 3210 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 MKI67P46013 3256 aaKnown RBP12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 HOXD10P28358 340 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 HMGCS2P54868 508 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 JAG1P78504 1218 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 GABPAQ06546 454 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 SMCR8Q8TEV9 937 aaPredicted RBP12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 ARHGAP39Q9C0H5 1083 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
PTCD2P1-201ENST00000554393 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 MBD4O95243 580 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 GDF11O95390 407 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 PSMC4P43686 418 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 GCLCP48506 637 aaPredicted RBP12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 PLCD1P51178 756 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 FCGRTP55899 365 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 MTMR2Q13614 643 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 KBTBD3Q8NAB2 608 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms