RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 IPO7O95373 1038 aaKnown RBP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 CCDC175P0C221 793 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 PIP4K2BP78356 416 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 FANCBQ8NB91 859 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 ESR2Q92731 530 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 AGXT2Q9BYV1 514 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 MAN1B1Q9UKM7 699 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 TSPY2A6NKD2 308 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 ARHGAP6O43182 974 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 TFRCP02786 760 aaKnown RBP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 OSBPL5Q9H0X9 879 aaPredicted RBP13.01□□□□□ -0.33
PTPN21-205ENST00000554270 VPS18Q9P253 973 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 USP17L12C9JPN9 530 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 USP17L21D6R901 530 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 CHRNDQ07001 517 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
PTPN21-205ENST00000554270 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 EIF5P55010 431 aaKnown RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 PPARAQ07869 468 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 FOXP4Q8IVH2 680 aaPredicted RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 SLF1Q9BQI6 1058 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 STX8Q9UNK0 236 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 TNS3Q68CZ2 1445 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 CNNM2Q9H8M5 875 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 LRRC37A3O60309 1634 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 FAM170AA1A519 330 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 DHX37Q8IY37 1157 aaKnown RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 RASGRP4Q8TDF6 673 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
PTPN21-205ENST00000554270 RNF41Q9H4P4 317 aaPredicted RBP13□□□□□ -0.33
PTPN21-205ENST00000554270 CYP19A1P11511 503 aaPredicted RBP12.99□□□□□ -0.33
PTPN21-205ENST00000554270 NCAPHQ15003 741 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
PTPN21-205ENST00000554270 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 MARCH6O60337 910 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 CSF1RP07333 972 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 DDB1Q16531 1140 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 ACRBPQ8NEB7 543 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 KIAA1328Q86T90 577 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 ANKRD18AQ8IVF6 992 aa12.99□□□□□ -0.33
PTPN21-205ENST00000554270 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
PTPN21-205ENST00000554270 DEXIO95424 95 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 CASP14P31944 242 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 EVX2Q03828 476 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
PTPN21-205ENST00000554270 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 PSMB7Q99436 277 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 MORC2Q9Y6X9 1032 aaPredicted RBP12.98□□□□□ -0.33
PTPN21-205ENST00000554270 ENC1O14682 589 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 SLFN14P0C7P3 912 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
PTPN21-205ENST00000554270 RBL2Q08999 1139 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 RILPL1Q5EBL4 403 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 ANKRD65E5RJM6 399 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 ZMYND10O75800 440 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 MMP1P03956 469 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 CHMP4BP1P59074 171 aa12.98□□□□□ -0.33
PTPN21-205ENST00000554270 C10orf67Q8IYJ2 551 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
PTPN21-205ENST00000554270 PARD6BQ9BYG5 372 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 MCM9Q9NXL9 1143 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 RFX7Q2KHR2 1363 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 SOS2Q07890 1332 aaPredicted RBP12.97□□□□□ -0.33
PTPN21-205ENST00000554270 SYNRGQ9UMZ2 1314 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 A0A0U1RQJ8 604 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 USP5P45974 858 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 UBXN1Q04323 297 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
PTPN21-205ENST00000554270 AK7Q96M32 723 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 MKNK2Q9HBH9 465 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 ZNF446Q9NWS9 450 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 IKBKBO14920 756 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 TXLNAP40222 546 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 MRPS25P82663 173 aaKnown RBP12.97□□□□□ -0.33
PTPN21-205ENST00000554270 CPVLQ9H3G5 476 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 MAGEC2Q9UBF1 373 aaPredicted RBP12.97□□□□□ -0.33
PTPN21-205ENST00000554270 CYP2D6P10635 497 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 KRT2P35908 639 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 CRACR2BQ8N4Y2 399 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms