RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 AEBP1Q8IUX7 1158 aa6.29□□□□□ -1.4
IFT43-207ENST00000554233 ANKRD24Q8TF21 1146 aa6.29□□□□□ -1.4
IFT43-207ENST00000554233 SSBP4Q9BWG4 385 aaPredicted RBP6.29□□□□□ -1.4
IFT43-207ENST00000554233 LACRTQ9GZZ8 138 aa6.29□□□□□ -1.4
IFT43-207ENST00000554233 GGNBP2Q9H3C7 697 aa6.29□□□□□ -1.4
IFT43-207ENST00000554233 PANK3Q9H999 370 aa6.29□□□□□ -1.4
IFT43-207ENST00000554233 ABI2Q9NYB9 513 aaPredicted RBP6.29□□□□□ -1.4
IFT43-207ENST00000554233 MEGF6O75095 1541 aa6.29□□□□□ -1.4
IFT43-207ENST00000554233 SCO2A0A1W2PP80 73 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 PLSCR1O15162 318 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 ALX3O95076 343 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 SETDB1Q15047 1291 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 DDB1Q16531 1140 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 MARCH10Q8NA82 808 aaPredicted RBP6.28□□□□□ -1.4
IFT43-207ENST00000554233 EDEM1Q92611 657 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 MEGF10Q96KG7 1140 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 POLKQ9UBT6 870 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 DLG5Q8TDM6 1919 aa6.28□□□□□ -1.4
IFT43-207ENST00000554233 SIPA1L3O60292 1781 aaPredicted RBP6.28□□□□□ -1.4
IFT43-207ENST00000554233 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 IL2RBP14784 551 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 FBLN1P23142 703 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 CDC25BP30305 580 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 DNM1Q05193 864 aaKnown RBP6.27□□□□□ -1.41
IFT43-207ENST00000554233 RRS1Q15050 365 aaKnown RBP6.27□□□□□ -1.41
IFT43-207ENST00000554233 TXNDC11Q6PKC3 985 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 ZNF438Q7Z4V0 828 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 HELQQ8TDG4 1101 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 CAMKK2Q96RR4 588 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 RASSF4Q9H2L5 321 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 ELP3Q9H9T3 547 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 KANSL3Q9P2N6 904 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 PPME1Q9Y570 386 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 UBR3Q6ZT12 1888 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 KDRP35968 1356 aa6.27□□□□□ -1.41
IFT43-207ENST00000554233 COL3A1P02461 1466 aaPredicted RBP6.27□□□□□ -1.41
IFT43-207ENST00000554233 C5P01031 1676 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 COL5A3P25940 1745 aaPredicted RBP6.26□□□□□ -1.41
IFT43-207ENST00000554233 TMEM88BA6NKF7 163 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 EXOC5O00471 708 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 SMNDC1O75940 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
IFT43-207ENST00000554233 MPSTP25325 297 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 AMPHP49418 695 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 PDE3BQ13370 1112 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 MTMR3Q13615 1198 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 HSP90AB2PQ58FF8 381 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 NBPF6Q5VWK0 638 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 NCAPG2Q86XI2 1143 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 GTF3C2Q8WUA4 911 aaPredicted RBP6.26□□□□□ -1.41
IFT43-207ENST00000554233 NBPF4Q96M43 638 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 MRPL18Q9H0U6 180 aaKnown RBP6.26□□□□□ -1.41
IFT43-207ENST00000554233 AKTIPQ9H8T0 292 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 CNTN3Q9P232 1028 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 USP35Q9P2H5 1018 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 MTMR7Q9Y216 660 aa6.26□□□□□ -1.41
IFT43-207ENST00000554233 MYH14Q7Z406 1995 aaKnown RBP6.26□□□□□ -1.41
IFT43-207ENST00000554233 IGSF1Q8N6C5 1336 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 CARNS1A5YM72 827 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 A6NHS1 94 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 MFAP1P55081 439 aaKnown RBP6.25□□□□□ -1.41
IFT43-207ENST00000554233 C8orf34Q49A92 452 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 NOM1Q5C9Z4 860 aaKnown RBP6.25□□□□□ -1.41
IFT43-207ENST00000554233 PDE12Q6L8Q7 609 aaKnown RBP6.25□□□□□ -1.41
IFT43-207ENST00000554233 ADAMTSL4Q6UY14 1074 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 MAP4K3Q8IVH8 894 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 CACTIN-AS1Q8N1I8 211 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 AGGF1Q8N302 714 aaeCLIP6.25□□□□□ -1.41
IFT43-207ENST00000554233 GALNT11Q8NCW6 608 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 SRA1Q9HD15 236 aaKnown RBP6.25□□□□□ -1.41
IFT43-207ENST00000554233 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.25□□□□□ -1.41
IFT43-207ENST00000554233 UBR2Q8IWV8 1755 aa6.25□□□□□ -1.41
IFT43-207ENST00000554233 F8W735 103 aaPredicted RBP6.24□□□□□ -1.41
IFT43-207ENST00000554233 IGSF3O75054 1194 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 TRIM37O94972 964 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 KIF4AO95239 1232 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 PCSK2P16519 638 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 SSFA2P28290 1259 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 CDC27P30260 824 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 DEFB132Q7Z7B7 95 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 CEP120Q8N960 986 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 PBX4Q9BYU1 374 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 MUC3BQ9H195 1237 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 SH2B1Q9NRF2 756 aaPredicted RBP6.24□□□□□ -1.41
IFT43-207ENST00000554233 KNSTRNQ9Y448 316 aa6.24□□□□□ -1.41
IFT43-207ENST00000554233 PDGFAP04085 211 aa6.23□□□□□ -1.41
IFT43-207ENST00000554233 RPLP1P05386 114 aaKnown RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 HMGB1P09429 215 aaKnown RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 ACPPP15309 386 aa6.23□□□□□ -1.41
IFT43-207ENST00000554233 EIF1AXP47813 144 aaKnown RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 SF3B2Q13435 895 aaKnown RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 AAMPQ13685 434 aa6.23□□□□□ -1.41
IFT43-207ENST00000554233 EIF4A2Q14240 407 aaKnown RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 TMEM130Q8N3G9 435 aa6.23□□□□□ -1.41
IFT43-207ENST00000554233 C1orf127Q8N9H9 656 aa6.23□□□□□ -1.41
IFT43-207ENST00000554233 TTC16Q8NEE8 873 aa6.23□□□□□ -1.41
IFT43-207ENST00000554233 ZCRB1Q8TBF4 217 aaKnown RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 GZF1Q9H116 711 aaPredicted RBP6.23□□□□□ -1.41
IFT43-207ENST00000554233 CYP27B1O15528 508 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms