RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TSPY3P0CV98 308 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 TSPY8P0CW00 308 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 SLC4A3P48751 1232 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 WTAPQ15007 396 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 SEC23AQ15436 765 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 ME3Q16798 604 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 SLC4A8Q2Y0W8 1093 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 TATDN1Q6P1N9 297 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 NOL8Q76FK4 1167 aaKnown RBP8.98□□□□□ -0.97
TDP1-209ENST00000554180 SH3BP5LQ7L8J4 393 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 CHST3Q7LGC8 479 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 DGKHQ86XP1 1220 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 ZFPM1Q8IX07 1006 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 STK11IPQ8N1F8 1099 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 CRACR2BQ8N4Y2 399 aaPredicted RBP8.98□□□□□ -0.97
TDP1-209ENST00000554180 ENAHQ8N8S7 591 aaPredicted RBP8.98□□□□□ -0.97
TDP1-209ENST00000554180 SLC44A5Q8NCS7 719 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 NEDD1Q8NHV4 660 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 TRPM4Q8TD43 1214 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 ANKS1AQ92625 1134 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 GTF3C6Q969F1 213 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 TRIM34Q9BYJ4 488 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 CWC22Q9HCG8 908 aaKnown RBP8.98□□□□□ -0.97
TDP1-209ENST00000554180 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.98□□□□□ -0.97
TDP1-209ENST00000554180 KLF18A0A0U1RQI7 1052 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 DCAF8L1A6NGE4 600 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 CCDC69A6NI79 296 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 LARGE1O95461 756 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 PDIA3P30101 505 aaKnown RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 SHMT1P34896 483 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 EPS15P42566 896 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 TFAP4Q01664 338 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 MAP3K10Q02779 954 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 PPP2R5BQ15173 497 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 IFIT1BQ5T764 474 aaKnown RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 RBM26Q5T8P6 1007 aaKnown RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 APOA5Q6Q788 366 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 SYNE3Q6ZMZ3 975 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 NFXL1Q6ZNB6 911 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 USP50Q70EL3 339 aaPredicted RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 HOOK2Q96ED9 719 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 LLPHQ9BRT6 129 aaKnown RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 SLKQ9H2G2 1235 aaPredicted RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 DNAJC18Q9H819 358 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 HACL1Q9UJ83 578 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 CIZ1Q9ULV3 898 aaPredicted RBP8.97□□□□□ -0.97
TDP1-209ENST00000554180 SLC12A7Q9Y666 1083 aa8.97□□□□□ -0.97
TDP1-209ENST00000554180 GOLGA8BA8MQT2 603 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 DDAH1O94760 285 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 CALM1P0DP23 149 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 CALM2P0DP24 149 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 CALM3P0DP25 149 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.98
TDP1-209ENST00000554180 DDIT3P35638 169 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 NOVP48745 357 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 RASA3Q14644 834 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 FAM47AQ5JRC9 791 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
TDP1-209ENST00000554180 TEPSINQ96N21 525 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 ZKSCAN3Q9BRR0 538 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 TMEM39BQ9GZU3 492 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 DEFB129Q9H1M3 183 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 GPHNQ9NQX3 736 aaPredicted RBP8.96□□□□□ -0.98
TDP1-209ENST00000554180 GGA3Q9NZ52 723 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 SIPA1L1O43166 1804 aa8.96□□□□□ -0.98
TDP1-209ENST00000554180 IGKV6D-41A0A0C4DH26 115 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 CCDC196A0A1B0GTZ2 297 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 ZBTB43O43298 467 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 CDKL5O76039 1030 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 METAP2P50579 478 aaKnown RBP eCLIP8.95□□□□□ -0.98
TDP1-209ENST00000554180 HIRAP54198 1017 aaPredicted RBP8.95□□□□□ -0.98
TDP1-209ENST00000554180 HMGN5P82970 282 aaKnown RBP8.95□□□□□ -0.98
TDP1-209ENST00000554180 ST3GAL1Q11201 340 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 SCRN1Q12765 414 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 CERKLQ49MI3 558 aaPredicted RBP8.95□□□□□ -0.98
TDP1-209ENST00000554180 ANGEL2Q5VTE6 544 aaKnown RBP8.95□□□□□ -0.98
TDP1-209ENST00000554180 RCSD1Q6JBY9 416 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 TMEM179Q6ZVK1 233 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 CATIPQ7Z7H3 387 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 PNMA8AQ86V59 439 aaPredicted RBP8.95□□□□□ -0.98
TDP1-209ENST00000554180 CCDC83Q8IWF9 413 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 ZNF654Q8IZM8 581 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 MAP3K14Q99558 947 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 LARP6Q9BRS8 491 aaKnown RBP8.95□□□□□ -0.98
TDP1-209ENST00000554180 KAT14Q9H8E8 782 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.95□□□□□ -0.98
TDP1-209ENST00000554180 IL17RBQ9NRM6 502 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 GINM1Q9NU53 330 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 MTMR4Q9NYA4 1195 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 SYNPO2Q9UMS6 1093 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 KIF3AQ9Y496 699 aa8.95□□□□□ -0.98
TDP1-209ENST00000554180 WDR90Q96KV7 1748 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 SCN4AP35499 1836 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms