RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 LRRC2Q9BYS8 371 aa12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 DDTLA6NHG4 134 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 LIFRP42702 1097 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 ANTXR2P58335 489 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 GABPAQ06546 454 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 TOB2Q14106 344 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 RASA3Q14644 834 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 ZNF274Q96GC6 653 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 SLKQ9H2G2 1235 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 PPP2R3BQ9Y5P8 575 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 ATRNL1Q5VV63 1379 aa12.28□□□□□ -0.44
TMEM55B-205ENST00000554028 SMIM22K7EJ46 135 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 SH2B2O14492 632 aaPredicted RBP12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 EGFRP00533 1210 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 RASA1P20936 1047 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 EPHX2P34913 555 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 CERKLQ49MI3 558 aaPredicted RBP12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 IFIT1BQ5T764 474 aaKnown RBP12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 TRPM4Q8TD43 1214 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 TACC3Q9Y6A5 838 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 PITPNM2Q9BZ72 1349 aa12.27□□□□□ -0.45
TMEM55B-205ENST00000554028 ZNF646O15015 1829 aaPredicted RBP12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 TBC1D12O60347 775 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 DCAF15Q66K64 600 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 SH3BP5LQ7L8J4 393 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 SLC44A5Q8NCS7 719 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 TMEM39BQ9GZU3 492 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 TPCN1Q9ULQ1 816 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 DICER1Q9UPY3 1922 aaKnown RBP12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 TNKSO95271 1327 aa12.26□□□□□ -0.45
TMEM55B-205ENST00000554028 ZBTB43O43298 467 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 CALM1P0DP23 149 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 CALM2P0DP24 149 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 CALM3P0DP25 149 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 HIRAP54198 1017 aaPredicted RBP12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 EVCP57679 992 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 STK3Q13188 491 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 TATDN1Q6P1N9 297 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 INTS4Q96HW7 963 aaKnown RBP12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 LY9Q9HBG7 655 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 CNTNAP1P78357 1384 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 SBF1O95248 1867 aa12.25□□□□□ -0.45
TMEM55B-205ENST00000554028 CCDC196A0A1B0GTZ2 297 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 CPLX1O14810 134 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 SHMT1P34896 483 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 CUL4AQ13619 759 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 COL9A3Q14050 684 aaPredicted RBP12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 ME3Q16798 604 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 ABCB5Q2M3G0 1257 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 EAPPQ56P03 285 aaPredicted RBP12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
TMEM55B-205ENST00000554028 NAV1Q8NEY1 1877 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 PFKFB2O60825 505 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 AKR1B1P15121 316 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 NF2P35240 595 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 METAP2P50579 478 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms