RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SF3B2Q13435 895 aaKnown RBP4.95□□□□□ -1.62
SLIRP-202ENST00000553981 COL19A1Q14993 1142 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 ZNF423Q2M1K9 1284 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 SPRED3Q2MJR0 410 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 PHLDB3Q6NSJ2 640 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 CCNJLQ8IV13 435 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 TP53INP2Q8IXH6 220 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 FBXL18Q96ME1 805 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 CLEC4MQ9H2X3 399 aaPredicted RBP4.95□□□□□ -1.62
SLIRP-202ENST00000553981 SLC52A1Q9NWF4 448 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 TRPM2O94759 1503 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 SETD5Q9C0A6 1442 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 ANKRD50Q9ULJ7 1429 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 NCOA3Q9Y6Q9 1424 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 SPATA31A6Q5VVP1 1343 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 NALCNQ8IZF0 1738 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 ANKRD30AQ9BXX3 1397 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 A0A1W2PP55 124 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 CYP11A1P05108 521 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 NFICP08651 508 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 POU4F3Q15319 338 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 GALNT12Q8IXK2 581 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 TCF12Q99081 682 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 SEMA6CQ9H3T2 930 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 C19orf44Q9H6X5 657 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 LIN7BQ9HAP6 207 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 ANO2Q9NQ90 1003 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 BSDC1Q9NW68 430 aaPredicted RBP4.94□□□□□ -1.62
SLIRP-202ENST00000553981 MTMR7Q9Y216 660 aa4.94□□□□□ -1.62
SLIRP-202ENST00000553981 RPRD2Q5VT52 1461 aaKnown RBP4.94□□□□□ -1.62
SLIRP-202ENST00000553981 CDK12Q9NYV4 1490 aaPredicted RBP4.94□□□□□ -1.62
SLIRP-202ENST00000553981 KANK1Q14678 1352 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 CARNS1A5YM72 827 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 ECEL1O95672 775 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 ABL1P00519 1130 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 RAB6AP20340 208 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 ZNF211Q13398 564 aaPredicted RBP4.93□□□□□ -1.62
SLIRP-202ENST00000553981 MAP7Q14244 749 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 ZNF772Q68DY9 489 aaPredicted RBP4.93□□□□□ -1.62
SLIRP-202ENST00000553981 OGFOD2Q6N063 350 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 DYMQ7RTS9 669 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 CCDC82Q8N4S0 544 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 ORAI2Q96SN7 254 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 FAM105AQ9NUU6 356 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 ZC3H7BQ9UGR2 993 aaKnown RBP4.93□□□□□ -1.62
SLIRP-202ENST00000553981 IQGAP3Q86VI3 1631 aa4.93□□□□□ -1.62
SLIRP-202ENST00000553981 NEXMIFQ5QGS0 1516 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.92□□□□□ -1.62
SLIRP-202ENST00000553981 FZD5Q13467 585 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 AKAP4Q5JQC9 854 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 DUSP27Q5VZP5 1158 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 ZNF765Q7L2R6 523 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 C8orf37Q96NL8 207 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 TRIM56Q9BRZ2 755 aaKnown RBP4.92□□□□□ -1.62
SLIRP-202ENST00000553981 GSX1Q9H4S2 264 aaPredicted RBP4.92□□□□□ -1.62
SLIRP-202ENST00000553981 ACSS3Q9H6R3 686 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 PAK6Q9NQU5 681 aaPredicted RBP4.92□□□□□ -1.62
SLIRP-202ENST00000553981 AP4E1Q9UPM8 1137 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 LAMC1P11047 1609 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 CLTCL1P53675 1640 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 C1orf167Q5SNV9 1468 aa4.92□□□□□ -1.62
SLIRP-202ENST00000553981 PIK3R4Q99570 1358 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 ROBO2Q9HCK4 1378 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 PPP1R15AO75807 674 aaPredicted RBP4.91□□□□□ -1.62
SLIRP-202ENST00000553981 ITGB5P18084 799 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 CYP27A1Q02318 531 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 FAM50AQ14320 339 aaKnown RBP4.91□□□□□ -1.62
SLIRP-202ENST00000553981 HP1BP3Q5SSJ5 553 aaPredicted RBP4.91□□□□□ -1.62
SLIRP-202ENST00000553981 MEX3CQ5U5Q3 659 aaKnown RBP4.91□□□□□ -1.62
SLIRP-202ENST00000553981 USPL1Q5W0Q7 1092 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 SEZ6L2Q6UXD5 910 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 FLCNQ8NFG4 579 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 ASIC4Q96FT7 647 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 LRRC4CQ9HCJ2 640 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 C1GALT1Q9NS00 363 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 RAD18Q9NS91 495 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 BCL9LQ86UU0 1499 aa4.91□□□□□ -1.62
SLIRP-202ENST00000553981 ATRNO75882 1429 aa4.9□□□□□ -1.62
SLIRP-202ENST00000553981 ADGRL3Q9HAR2 1447 aa4.9□□□□□ -1.62
SLIRP-202ENST00000553981 DYNC1LI2O43237 492 aaPredicted RBP4.9□□□□□ -1.63
SLIRP-202ENST00000553981 B3GALT4O96024 378 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 ATF3P18847 181 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 ASPAP45381 313 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 RBM6P78332 1123 aaKnown RBP4.9□□□□□ -1.63
SLIRP-202ENST00000553981 KIAA0319Q5VV43 1072 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 AGBL5Q8NDL9 886 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 CORO1BQ9BR76 489 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 ZNF576Q9H609 170 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 ZFYVE1Q9HBF4 777 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 GLI3P10071 1580 aa4.9□□□□□ -1.63
SLIRP-202ENST00000553981 DCCP43146 1447 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 MYOM2P54296 1465 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 BRWD3Q6RI45 1802 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 ICMTO60725 284 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 AOC2O75106 756 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 JUNBP17275 347 aaPredicted RBP4.89□□□□□ -1.63
SLIRP-202ENST00000553981 ITPKAP23677 461 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 XPCQ01831 940 aaPredicted RBP4.89□□□□□ -1.63
SLIRP-202ENST00000553981 ECM1Q16610 540 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms