RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 AACSQ86V21 672 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 MAGEB6Q8N7X4 407 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 MIGA1Q8NAN2 632 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 DPF3Q92784 378 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 GINM1Q9NU53 330 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 TMOD4Q9NZQ9 345 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 NDUFB9Q9Y6M9 179 aa19.27■□□□□ 0.68
TUBB3-203ENST00000553967 CEP290O15078 2479 aa19.27■□□□□ 0.67
TUBB3-203ENST00000553967 GDF11O95390 407 aa19.26■□□□□ 0.67
TUBB3-203ENST00000553967 SGPL1O95470 568 aa19.26■□□□□ 0.67
TUBB3-203ENST00000553967 SHROOM1Q2M3G4 852 aaPredicted RBP19.26■□□□□ 0.67
TUBB3-203ENST00000553967 CERS3Q8IU89 383 aa19.26■□□□□ 0.67
TUBB3-203ENST00000553967 ANTXR1Q9H6X2 564 aa19.26■□□□□ 0.67
TUBB3-203ENST00000553967 COLQQ9Y215 455 aaPredicted RBP19.26■□□□□ 0.67
TUBB3-203ENST00000553967 C19orf81C9J6K1 198 aa19.25■□□□□ 0.67
TUBB3-203ENST00000553967 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-203ENST00000553967 IRX3P78415 501 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-203ENST00000553967 MAP3K12Q12852 859 aa19.25■□□□□ 0.67
TUBB3-203ENST00000553967 HTATIP2Q9BUP3 242 aa19.25■□□□□ 0.67
TUBB3-203ENST00000553967 ZBTB21Q9ULJ3 1066 aa19.25■□□□□ 0.67
TUBB3-203ENST00000553967 USP17L10C9JJH3 530 aa19.24■□□□□ 0.67
TUBB3-203ENST00000553967 FARP2O94887 1054 aaPredicted RBP19.24■□□□□ 0.67
TUBB3-203ENST00000553967 USP5P45974 858 aa19.24■□□□□ 0.67
TUBB3-203ENST00000553967 HSP90AB4PQ58FF6 505 aa19.24■□□□□ 0.67
TUBB3-203ENST00000553967 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
TUBB3-203ENST00000553967 P2RX7Q99572 595 aaKnown RBP19.24■□□□□ 0.67
TUBB3-203ENST00000553967 MORF4L1Q9UBU8 362 aa19.24■□□□□ 0.67
TUBB3-203ENST00000553967 MS4A1P11836 297 aa19.23■□□□□ 0.67
TUBB3-203ENST00000553967 DEFB118Q96PH6 123 aa19.23■□□□□ 0.67
TUBB3-203ENST00000553967 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
TUBB3-203ENST00000553967 PAK6Q9NQU5 681 aaPredicted RBP19.23■□□□□ 0.67
TUBB3-203ENST00000553967 GJD2Q9UKL4 321 aa19.23■□□□□ 0.67
TUBB3-203ENST00000553967 MYH1P12882 1939 aa19.22■□□□□ 0.67
TUBB3-203ENST00000553967 TFRCP02786 760 aaKnown RBP19.22■□□□□ 0.67
TUBB3-203ENST00000553967 CAPN2P17655 700 aa19.22■□□□□ 0.67
TUBB3-203ENST00000553967 HERVK_113P62684 666 aa19.22■□□□□ 0.67
TUBB3-203ENST00000553967 RHPN1Q8TCX5 695 aa19.22■□□□□ 0.67
TUBB3-203ENST00000553967 GH2P01242 217 aa19.21■□□□□ 0.67
TUBB3-203ENST00000553967 FXR1P51114 621 aaKnown RBP eCLIP19.21■□□□□ 0.67
TUBB3-203ENST00000553967 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
TUBB3-203ENST00000553967 GPRC5AQ8NFJ5 357 aa19.21■□□□□ 0.67
TUBB3-203ENST00000553967 EHD4Q9H223 541 aa19.21■□□□□ 0.67
TUBB3-203ENST00000553967 EMILIN3Q9NT22 766 aa19.21■□□□□ 0.67
TUBB3-203ENST00000553967 SERPINB13Q9UIV8 391 aa19.21■□□□□ 0.67
TUBB3-203ENST00000553967 PEX10O60683 326 aa19.2■□□□□ 0.66
TUBB3-203ENST00000553967 HMGCRP04035 888 aa19.2■□□□□ 0.66
TUBB3-203ENST00000553967 TTF1Q15361 905 aaPredicted RBP19.2■□□□□ 0.66
TUBB3-203ENST00000553967 USP17L2Q6R6M4 530 aa19.2■□□□□ 0.66
TUBB3-203ENST00000553967 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
TUBB3-203ENST00000553967 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
TUBB3-203ENST00000553967 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
TUBB3-203ENST00000553967 CRISPLD2Q9H0B8 497 aa19.2■□□□□ 0.66
TUBB3-203ENST00000553967 TXNRD2Q9NNW7 524 aa19.2■□□□□ 0.66
TUBB3-203ENST00000553967 APBB1O00213 710 aa19.19■□□□□ 0.66
TUBB3-203ENST00000553967 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
TUBB3-203ENST00000553967 CLASRPQ8N2M8 674 aaKnown RBP19.19■□□□□ 0.66
TUBB3-203ENST00000553967 KIF1BPQ96EK5 621 aa19.19■□□□□ 0.66
TUBB3-203ENST00000553967 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■■■□ 24.2
TUBB3-203ENST00000553967 RBPJLQ9UBG7 517 aa19.19■□□□□ 0.66
TUBB3-203ENST00000553967 NR2E3Q9Y5X4 410 aa19.19■□□□□ 0.66
TUBB3-203ENST00000553967 MAGEB6P1A0A0J9YX57 407 aa19.18■□□□□ 0.66
TUBB3-203ENST00000553967 HMMRO75330 724 aa19.18■□□□□ 0.66
TUBB3-203ENST00000553967 CERKLQ49MI3 558 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-203ENST00000553967 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
TUBB3-203ENST00000553967 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
TUBB3-203ENST00000553967 DDX19BQ9UMR2 479 aa19.18■□□□□ 0.66
TUBB3-203ENST00000553967 COG6Q9Y2V7 657 aa19.18■□□□□ 0.66
TUBB3-203ENST00000553967 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 IFIT2P09913 472 aaKnown RBP19.17■□□□□ 0.66
TUBB3-203ENST00000553967 PDE6AP16499 860 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 CYP2B6P20813 491 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 ERVK-24P63145 666 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 TRIM32Q13049 653 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 RAB3GAP1Q15042 981 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 ZYXQ15942 572 aaKnown RBP19.17■□□□□ 0.66
TUBB3-203ENST00000553967 ABCB5Q2M3G0 1257 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 SIRT2Q8IXJ6 389 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.17■□□□□ 0.66
TUBB3-203ENST00000553967 GTF3C2Q8WUA4 911 aaPredicted RBP19.17■□□□□ 0.66
TUBB3-203ENST00000553967 C12orf42Q96LP6 360 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 FEZ1Q99689 392 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 NUDT12Q9BQG2 462 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 HMX1Q9NP08 348 aaPredicted RBP19.17■□□□□ 0.66
TUBB3-203ENST00000553967 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
TUBB3-203ENST00000553967 PLXNB2O15031 1838 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 GOLIM4O00461 696 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 POLR3DP05423 398 aaPredicted RBP19.16■□□□□ 0.66
TUBB3-203ENST00000553967 MAPK4P31152 587 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 PLCD1P51178 756 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 Q3C1V9 767 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 CCAR1Q8IX12 1150 aaKnown RBP19.16■□□□□ 0.66
TUBB3-203ENST00000553967 SOCS4Q8WXH5 440 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 TRIB2Q92519 343 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 PAWRQ96IZ0 340 aaKnown RBP19.16■□□□□ 0.66
TUBB3-203ENST00000553967 DNAJC2Q99543 621 aaKnown RBP19.16■□□□□ 0.66
TUBB3-203ENST00000553967 PAGR1Q9BTK6 254 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 CRNKL1Q9BZJ0 848 aaKnown RBP19.16■□□□□ 0.66
TUBB3-203ENST00000553967 BCL11AQ9H165 835 aa19.16■□□□□ 0.66
TUBB3-203ENST00000553967 CABP5Q9NP86 173 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms