RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TATDN1Q6P1N9 297 aa17.07■□□□□ 0.32
SHMT2-210ENST00000553950 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
SHMT2-210ENST00000553950 ZNF341Q9BYN7 854 aa17.07■□□□□ 0.32
SHMT2-210ENST00000553950 RRAGCQ9HB90 399 aa17.07■□□□□ 0.32
SHMT2-210ENST00000553950 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
SHMT2-210ENST00000553950 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
SHMT2-210ENST00000553950 PRDM1O75626 825 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 SHMT1P34896 483 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 CERKLQ49MI3 558 aaPredicted RBP17.06■□□□□ 0.32
SHMT2-210ENST00000553950 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 STK11IPQ8N1F8 1099 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 SNX21Q969T3 373 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 CHMP4CQ96CF2 233 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 TTC14Q96N46 770 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
SHMT2-210ENST00000553950 CABP5Q9NP86 173 aa17.06■□□□□ 0.32
SHMT2-210ENST00000553950 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
SHMT2-210ENST00000553950 RBM19Q9Y4C8 960 aaKnown RBP17.06■□□□□ 0.32
SHMT2-210ENST00000553950 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
SHMT2-210ENST00000553950 NEDD1Q8NHV4 660 aa17.05■□□□□ 0.32
SHMT2-210ENST00000553950 AGXT2Q9BYV1 514 aa17.05■□□□□ 0.32
SHMT2-210ENST00000553950 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
SHMT2-210ENST00000553950 SSC5DA1L4H1 1573 aa17.05■□□□□ 0.32
SHMT2-210ENST00000553950 TNKSO95271 1327 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 IFIT3O14879 490 aaKnown RBP17.04■□□□□ 0.32
SHMT2-210ENST00000553950 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-210ENST00000553950 LIFRP42702 1097 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 TFAP4Q01664 338 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 WTAPQ15007 396 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 ZNF526Q8TF50 670 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-210ENST00000553950 ZSCAN10Q96SZ4 725 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-210ENST00000553950 NMRK2Q9NPI5 230 aa17.04■□□□□ 0.32
SHMT2-210ENST00000553950 ADM5C9JUS6 153 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 SH2B2O14492 632 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-210ENST00000553950 ASNSP08243 561 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 RCAN1P53805 252 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 AK2P54819 239 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 ANTXR2P58335 489 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 EVX2Q03828 476 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-210ENST00000553950 Q6ZUG5 572 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 CYB5R4Q7L1T6 521 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-210ENST00000553950 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-210ENST00000553950 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
SHMT2-210ENST00000553950 CCDC69A6NI79 296 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 SMIM22K7EJ46 135 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
SHMT2-210ENST00000553950 CTNND1O60716 968 aaKnown RBP17.02■□□□□ 0.32
SHMT2-210ENST00000553950 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
SHMT2-210ENST00000553950 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 SH2D4AQ9H788 454 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.32
SHMT2-210ENST00000553950 K7ELQ4 463 aaPredicted RBP17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CALM1P0DP23 149 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CALM2P0DP24 149 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CALM3P0DP25 149 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CPA1P15085 419 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 AKR1B1P15121 316 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CAP2P40123 477 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
SHMT2-210ENST00000553950 FKBP1BP68106 108 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 NFXL1Q6ZNB6 911 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 CDAN1Q8IWY9 1227 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 BRF1Q92994 677 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 KANSL2Q9H9L4 492 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 LY9Q9HBG7 655 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
SHMT2-210ENST00000553950 UNCXA6NJT0 531 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 FAM196BA6NMK8 535 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 DDAH1O94760 285 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 TTLL1O95922 423 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 ICA1Q05084 483 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 SEC23AQ15436 765 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 NOL9Q5SY16 702 aaKnown RBP17■□□□□ 0.31
SHMT2-210ENST00000553950 CHST3Q7LGC8 479 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
SHMT2-210ENST00000553950 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 ANKS1AQ92625 1134 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 WRNIP1Q96S55 665 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 GLIS2Q9BZE0 524 aaPredicted RBP17■□□□□ 0.31
SHMT2-210ENST00000553950 KAT14Q9H8E8 782 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 INCENPQ9NQS7 918 aa17■□□□□ 0.31
SHMT2-210ENST00000553950 DAXXQ9UER7 740 aaPredicted RBP17■□□□□ 0.31
SHMT2-210ENST00000553950 ZNF112Q9UJU3 913 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms