RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRKCH-208ENST00000553846 PTPRCP08575 1304 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 CNMDO75829 334 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 ERVK-24P63145 666 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 SMAD3P84022 425 aaKnown RBP11.31□□□□□ -0.6
PRKCH-208ENST00000553846 SNX17Q15036 470 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 SHHQ15465 462 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
PRKCH-208ENST00000553846 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
PRKCH-208ENST00000553846 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
PRKCH-208ENST00000553846 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
PRKCH-208ENST00000553846 DNM1LO00429 736 aa11.3□□□□□ -0.6
PRKCH-208ENST00000553846 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-208ENST00000553846 HOXC6P09630 235 aa11.3□□□□□ -0.6
PRKCH-208ENST00000553846 RGS2P41220 211 aa11.3□□□□□ -0.6
PRKCH-208ENST00000553846 RTP1P59025 263 aa11.3□□□□□ -0.6
PRKCH-208ENST00000553846 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
PRKCH-208ENST00000553846 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
PRKCH-208ENST00000553846 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
PRKCH-208ENST00000553846 HERC5Q9UII4 1024 aaKnown RBP11.3□□□□□ -0.6
PRKCH-208ENST00000553846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-208ENST00000553846 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-208ENST00000553846 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
PRKCH-208ENST00000553846 LPAR1Q92633 364 aa11.29□□□□□ -0.6
PRKCH-208ENST00000553846 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-208ENST00000553846 SENP6Q9GZR1 1112 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-208ENST00000553846 SIL1Q9H173 461 aa11.29□□□□□ -0.6
PRKCH-208ENST00000553846 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
PRKCH-208ENST00000553846 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
PRKCH-208ENST00000553846 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
PRKCH-208ENST00000553846 TRANK1O15050 2925 aa11.29□□□□□ -0.6
PRKCH-208ENST00000553846 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 CYBAP13498 195 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 COL9A1P20849 921 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-208ENST00000553846 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-208ENST00000553846 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 PLEKHH3Q7Z736 793 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 AS3MTQ9HBK9 375 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-208ENST00000553846 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 RAPGEFL1Q9UHV5 662 aa11.28□□□□□ -0.6
PRKCH-208ENST00000553846 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
PRKCH-208ENST00000553846 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-208ENST00000553846 C19orf81C9J6K1 198 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 ASNSP08243 561 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 ITGB8P26012 769 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-208ENST00000553846 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 GRB14Q14449 540 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-208ENST00000553846 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-208ENST00000553846 SSH1Q8WYL5 1049 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
PRKCH-208ENST00000553846 MYO5AQ9Y4I1 1855 aaKnown RBP11.26□□□□□ -0.61
PRKCH-208ENST00000553846 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 MSCO60682 206 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 FOSL2P15408 326 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 EPHB4P54760 987 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 TIMM10P62072 90 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 C1orf53Q5VUE5 145 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 NPLOC4Q8TAT6 608 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 SH3RF3Q8TEJ3 882 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-208ENST00000553846 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
PRKCH-208ENST00000553846 BADQ92934 168 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 TRIM43Q96BQ3 446 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-208ENST00000553846 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 PI4KBQ9UBF8 816 aa11.26□□□□□ -0.61
PRKCH-208ENST00000553846 PIEZO1Q92508 2521 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 SLC15A5A6NIM6 579 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 PTPREP23469 700 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 ARID4AP29374 1257 aaPredicted RBP11.25□□□□□ -0.61
PRKCH-208ENST00000553846 TRIM60Q495X7 471 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 EDC3Q96F86 508 aaKnown RBP11.25□□□□□ -0.61
PRKCH-208ENST00000553846 XAGE2Q96GT9 111 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 TMOD4Q9NZQ9 345 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 FLT1P17948 1338 aa11.25□□□□□ -0.61
PRKCH-208ENST00000553846 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
PRKCH-208ENST00000553846 CYP2C19P33261 490 aa11.24□□□□□ -0.61
PRKCH-208ENST00000553846 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
PRKCH-208ENST00000553846 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
PRKCH-208ENST00000553846 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms