RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 C19orf81C9J6K1 198 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 GDF11O95390 407 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 BACE1P56817 501 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 MYPNQ86TC9 1320 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 RAET1EQ8TD07 263 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 GPATCH3Q96I76 525 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 ZNF333Q96JL9 665 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 DCTPP1Q9H773 170 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 ZBTB21Q9ULJ3 1066 aa21.42■■□□□ 1.02
FOXN3-204ENST00000553840 USP17L10C9JJH3 530 aa21.41■■□□□ 1.02
FOXN3-204ENST00000553840 GCLCP48506 637 aaPredicted RBP21.41■■□□□ 1.02
FOXN3-204ENST00000553840 MTMR2Q13614 643 aa21.41■■□□□ 1.02
FOXN3-204ENST00000553840 ZSCAN25Q6NSZ9 544 aa21.41■■□□□ 1.02
FOXN3-204ENST00000553840 SMARCA5O60264 1052 aaPredicted RBP21.4■■□□□ 1.02
FOXN3-204ENST00000553840 CTGFP29279 349 aa21.4■■□□□ 1.02
FOXN3-204ENST00000553840 TATDN1Q6P1N9 297 aa21.4■■□□□ 1.02
FOXN3-204ENST00000553840 EDC3Q96F86 508 aaKnown RBP21.4■■□□□ 1.02
FOXN3-204ENST00000553840 CABP5Q9NP86 173 aa21.4■■□□□ 1.02
FOXN3-204ENST00000553840 ECHDC1Q9NTX5 307 aa21.4■■□□□ 1.02
FOXN3-204ENST00000553840 TCRBV5S4A2TA0A5A2 114 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 POTEFA5A3E0 1075 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 ADD2P35612 726 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.01
FOXN3-204ENST00000553840 FAM110CQ1W6H9 321 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 CERKLQ49MI3 558 aaPredicted RBP21.39■■□□□ 1.01
FOXN3-204ENST00000553840 ANKRD13CQ8N6S4 541 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 SH3TC2Q8TF17 1288 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 MCM9Q9NXL9 1143 aa21.39■■□□□ 1.01
FOXN3-204ENST00000553840 DDX60LQ5H9U9 1706 aaKnown RBP21.38■■□□□ 1.01
FOXN3-204ENST00000553840 TNPO2O14787 897 aaKnown RBP21.38■■□□□ 1.01
FOXN3-204ENST00000553840 GH2P01242 217 aa21.38■■□□□ 1.01
FOXN3-204ENST00000553840 IRX3P78415 501 aaPredicted RBP21.38■■□□□ 1.01
FOXN3-204ENST00000553840 ABCB5Q2M3G0 1257 aa21.38■■□□□ 1.01
FOXN3-204ENST00000553840 ASCC2Q9H1I8 757 aaPredicted RBP21.38■■□□□ 1.01
FOXN3-204ENST00000553840 MYH8P13535 1937 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 GRK4P32298 578 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 JAG1P78504 1218 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 UBE3CQ15386 1083 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 AMOTL1Q8IY63 956 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 LCORLQ8N3X6 602 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 SDR42E1Q8WUS8 393 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 COA7Q96BR5 231 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 ARMT1Q9H993 441 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 TAOK2Q9UL54 1235 aa21.37■■□□□ 1.01
FOXN3-204ENST00000553840 HTTP42858 3142 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 MBD4O95243 580 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 HOXA7P31268 230 aaPredicted RBP21.36■■□□□ 1.01
FOXN3-204ENST00000553840 PLCD1P51178 756 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 PRKCZQ05513 592 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 RAB3GAP1Q15042 981 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 USP17L2Q6R6M4 530 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 YTHDC1Q96MU7 727 aaKnown RBP21.36■■□□□ 1.01
FOXN3-204ENST00000553840 FEZ1Q99689 392 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
FOXN3-204ENST00000553840 ATP8A2Q9NTI2 1148 aa21.36■■□□□ 1.01
FOXN3-204ENST00000553840 BIN2Q9UBW5 565 aaPredicted RBP21.36■■□□□ 1.01
FOXN3-204ENST00000553840 KIAA0100Q14667 2235 aaKnown RBP21.35■■□□□ 1.01
FOXN3-204ENST00000553840 MYCP01106 439 aaPredicted RBP21.35■■□□□ 1.01
FOXN3-204ENST00000553840 USP14P54578 494 aa21.35■■□□□ 1.01
FOXN3-204ENST00000553840 UBXN2AP68543 259 aa21.35■■□□□ 1.01
FOXN3-204ENST00000553840 SLAIN1Q8ND83 568 aa21.35■■□□□ 1.01
FOXN3-204ENST00000553840 TNRC18O15417 2968 aaPredicted RBP21.34■■□□□ 1.01
FOXN3-204ENST00000553840 BAZ2AQ9UIF9 1905 aaKnown RBP21.34■■□□□ 1.01
FOXN3-204ENST00000553840 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
FOXN3-204ENST00000553840 SHROOM1Q2M3G4 852 aaPredicted RBP21.34■■□□□ 1.01
FOXN3-204ENST00000553840 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
FOXN3-204ENST00000553840 SWAP70Q9UH65 585 aa21.34■■□□□ 1.01
FOXN3-204ENST00000553840 SHMT1P34896 483 aa21.33■■□□□ 1.01
FOXN3-204ENST00000553840 FLT3LGP49771 235 aa21.33■■□□□ 1.01
FOXN3-204ENST00000553840 GTF3C2Q8WUA4 911 aaPredicted RBP21.33■■□□□ 1.01
FOXN3-204ENST00000553840 GABRQQ9UN88 632 aa21.33■■□□□ 1.01
FOXN3-204ENST00000553840 PCDHB15Q9Y5E8 787 aa21.33■■□□□ 1.01
FOXN3-204ENST00000553840 PDE4DIPQ5VU43 2346 aa21.33■■□□□ 1
FOXN3-204ENST00000553840 MPHOSPH10O00566 681 aaKnown RBP21.32■■□□□ 1
FOXN3-204ENST00000553840 GABPAQ06546 454 aa21.32■■□□□ 1
FOXN3-204ENST00000553840 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
FOXN3-204ENST00000553840 P2RX7Q99572 595 aaKnown RBP21.32■■□□□ 1
FOXN3-204ENST00000553840 ERC2O15083 957 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 ADCY3O60266 1144 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 HERVK_113P62684 666 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 IRF5Q13568 498 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 NKX2-3Q8TAU0 364 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 PXYLP1Q8TE99 480 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 C12orf42Q96LP6 360 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 KIAA1683Q9H0B3 1180 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 EMILIN3Q9NT22 766 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 SLC4A4Q9Y6R1 1079 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 CENPFP49454 3210 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 DOCK3Q8IZD9 2030 aa21.31■■□□□ 1
FOXN3-204ENST00000553840 TTC41PQ6P2S7 1318 aa21.3■■□□□ 1
FOXN3-204ENST00000553840 PRKAB2O43741 272 aa21.3■■□□□ 1
FOXN3-204ENST00000553840 ZYXQ15942 572 aaKnown RBP21.3■■□□□ 1
FOXN3-204ENST00000553840 SLFNL1Q499Z3 407 aa21.3■■□□□ 1
FOXN3-204ENST00000553840 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
FOXN3-204ENST00000553840 KBTBD3Q8NAB2 608 aa21.3■■□□□ 1
FOXN3-204ENST00000553840 USP17L15C9J2P7 530 aa21.29■■□□□ 1
FOXN3-204ENST00000553840 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
FOXN3-204ENST00000553840 USP17L11C9JVI0 530 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms