RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 LEFTY1O75610 366 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 EOMESO95936 686 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 RECKO95980 971 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 CYP7A1P22680 504 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 YARSP54577 528 aaKnown RBP5.67□□□□□ -1.5
VRK1-202ENST00000553683 OXCT1P55809 520 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 MLECQ14165 292 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 NKG7Q16617 165 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 IFI16Q16666 785 aaKnown RBP5.67□□□□□ -1.5
VRK1-202ENST00000553683 UBE3DQ7Z6J8 389 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 SLFN12Q8IYM2 578 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 REXO1Q8N1G1 1221 aaKnown RBP5.67□□□□□ -1.5
VRK1-202ENST00000553683 ZNF296Q8WUU4 475 aaPredicted RBP5.67□□□□□ -1.5
VRK1-202ENST00000553683 RNF34Q969K3 372 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 TNKS2Q9H2K2 1166 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 COPRSQ9NQ92 184 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 TJP2Q9UDY2 1190 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 CCDC39Q9UFE4 941 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 VAV3Q9UKW4 847 aa5.67□□□□□ -1.5
VRK1-202ENST00000553683 SLITRK5O94991 958 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 CEACAM5P06731 702 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 ZNF865P0CJ78 1059 aaPredicted RBP5.66□□□□□ -1.5
VRK1-202ENST00000553683 PRKCQQ04759 706 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 XP32Q5T750 250 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 PRAMEF13Q5VWM6 474 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 LETMD1Q6P1Q0 360 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 ACSF2Q96CM8 615 aaPredicted RBP5.66□□□□□ -1.5
VRK1-202ENST00000553683 SPATA32Q96LK8 384 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 HEXIM2Q96MH2 286 aaKnown RBP5.66□□□□□ -1.5
VRK1-202ENST00000553683 EHMT1Q9H9B1 1298 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 LRRC4CQ9HCJ2 640 aa5.66□□□□□ -1.5
VRK1-202ENST00000553683 PRDM5Q9NQX1 630 aaPredicted RBP5.66□□□□□ -1.5
VRK1-202ENST00000553683 ANGEL1Q9UNK9 670 aaKnown RBP5.66□□□□□ -1.5
VRK1-202ENST00000553683 PLCG1P19174 1290 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 ETV3P41162 512 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 KIR3DL1P43629 444 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 CLCN7P51798 805 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 SLITRK4Q8IW52 837 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 AGBL5Q8NDL9 886 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 MRRFQ96E11 262 aaKnown RBP5.65□□□□□ -1.5
VRK1-202ENST00000553683 ADAMTS1Q9UHI8 967 aa5.65□□□□□ -1.5
VRK1-202ENST00000553683 GNAT3A8MTJ3 354 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 HTR3BO95264 441 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 GP2P55259 537 aaKnown RBP5.64□□□□□ -1.51
VRK1-202ENST00000553683 FAM160A1Q05DH4 1040 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 SFRP5Q5T4F7 317 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 ARHGAP27Q6ZUM4 889 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 KIAA0825Q8IV33 1275 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 CYB5D2Q8WUJ1 264 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 BCL7CQ8WUZ0 217 aaPredicted RBP5.64□□□□□ -1.51
VRK1-202ENST00000553683 MIPEPQ99797 713 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 CEP131Q9UPN4 1083 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 SLC5A6Q9Y289 635 aa5.64□□□□□ -1.51
VRK1-202ENST00000553683 POLR3KQ9Y2Y1 108 aaPredicted RBP5.64□□□□□ -1.51
VRK1-202ENST00000553683 ZNF165P49910 485 aa5.63□□□□□ -1.51
VRK1-202ENST00000553683 COL9A2Q14055 689 aaPredicted RBP5.63□□□□□ -1.51
VRK1-202ENST00000553683 LRRFIP1Q32MZ4 808 aaKnown RBP5.63□□□□□ -1.51
VRK1-202ENST00000553683 ZNF654Q8IZM8 581 aa5.63□□□□□ -1.51
VRK1-202ENST00000553683 PIWIL2Q8TC59 973 aaKnown RBP5.63□□□□□ -1.51
VRK1-202ENST00000553683 HRASLS5Q96KN8 279 aa5.63□□□□□ -1.51
VRK1-202ENST00000553683 SPON2Q9BUD6 331 aa5.63□□□□□ -1.51
VRK1-202ENST00000553683 KIAA1522Q9P206 1035 aaPredicted RBP5.63□□□□□ -1.51
VRK1-202ENST00000553683 REV1Q9UBZ9 1251 aa5.63□□□□□ -1.51
VRK1-202ENST00000553683 DDX41Q9UJV9 622 aaKnown RBP5.63□□□□□ -1.51
VRK1-202ENST00000553683 F6X3S4 739 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 IMPDH2P12268 514 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 CCNFP41002 786 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 APOBRQ0VD83 1088 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 METTL16Q86W50 562 aaKnown RBP5.62□□□□□ -1.51
VRK1-202ENST00000553683 SPACA3Q8IXA5 215 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 PLD6Q8N2A8 252 aaKnown RBP5.62□□□□□ -1.51
VRK1-202ENST00000553683 FAM13CQ8NE31 585 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 DNAJB8Q8NHS0 232 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 ASB11Q8WXH4 323 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 GMIPQ9P107 970 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 TPX2Q9ULW0 747 aaKnown RBP5.62□□□□□ -1.51
VRK1-202ENST00000553683 PLAGL2Q9UPG8 496 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 CORINQ9Y5Q5 1042 aa5.62□□□□□ -1.51
VRK1-202ENST00000553683 ADAMTS4O75173 837 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 NKPD1Q17RQ9 610 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 NFXL1Q6ZNB6 911 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 THAP5Q7Z6K1 395 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 MFSD4AQ8N468 514 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 FAM181AQ8N9Y4 354 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 FBXO27Q8NI29 283 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 NKD1Q969G9 470 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 EAF1Q96JC9 268 aaPredicted RBP5.61□□□□□ -1.51
VRK1-202ENST00000553683 CCDC74BQ96LY2 380 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 BRMS1Q9HCU9 246 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 PAK6Q9NQU5 681 aaPredicted RBP5.61□□□□□ -1.51
VRK1-202ENST00000553683 LMCD1Q9NZU5 365 aa5.61□□□□□ -1.51
VRK1-202ENST00000553683 UNCXA6NJT0 531 aa5.6□□□□□ -1.51
VRK1-202ENST00000553683 MEIS3P2A8K0S8 358 aa5.6□□□□□ -1.51
VRK1-202ENST00000553683 CRKP46108 304 aa5.6□□□□□ -1.51
VRK1-202ENST00000553683 RAD51AP2Q09MP3 1159 aa5.6□□□□□ -1.51
VRK1-202ENST00000553683 RIN3Q8TB24 985 aa5.6□□□□□ -1.51
VRK1-202ENST00000553683 PPP1R13LQ8WUF5 828 aa5.6□□□□□ -1.51
VRK1-202ENST00000553683 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms