RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PPP1R12AO14974 1030 aaPredicted RBP5.51□□□□□ -1.53
TDP1-207ENST00000553617 AOC2O75106 756 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 GDF11O95390 407 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 PGRP06401 933 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 VIL1P09327 827 aaKnown RBP5.51□□□□□ -1.53
TDP1-207ENST00000553617 NID1P14543 1247 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 NTF4P34130 210 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 MASP1P48740 699 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 NLRP12P59046 1061 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 ANAPC15P60006 121 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 TCEA2Q15560 299 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 SLC10A6Q3KNW5 377 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 DALRD3Q5D0E6 543 aaKnown RBP5.51□□□□□ -1.53
TDP1-207ENST00000553617 TMEM67Q5HYA8 995 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 HP1BP3Q5SSJ5 553 aaPredicted RBP5.51□□□□□ -1.53
TDP1-207ENST00000553617 MCATQ8IVS2 390 aaKnown RBP5.51□□□□□ -1.53
TDP1-207ENST00000553617 SLFN12Q8IYM2 578 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 SPATA9Q9BWV2 254 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 USP26Q9BXU7 913 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 ZNF214Q9UL59 606 aaPredicted RBP5.51□□□□□ -1.53
TDP1-207ENST00000553617 PCDHB10Q9UN67 800 aa5.51□□□□□ -1.53
TDP1-207ENST00000553617 PRAMEF27A3QJZ7 478 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 RNF225M0QZC1 329 aaPredicted RBP5.5□□□□□ -1.53
TDP1-207ENST00000553617 TMPRSS2O15393 492 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 DDX3YO15523 660 aaKnown RBP5.5□□□□□ -1.53
TDP1-207ENST00000553617 DEAF1O75398 565 aaPredicted RBP5.5□□□□□ -1.53
TDP1-207ENST00000553617 ASMTLO95671 621 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 FAM153BP0C7A2 387 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 CCNFP41002 786 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 PPM1JQ5JR12 505 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 ZBTB37Q5TC79 503 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 ZNF385CQ66K41 422 aaPredicted RBP5.5□□□□□ -1.53
TDP1-207ENST00000553617 KIAA1211LQ6NV74 962 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 MRPL41Q8IXM3 137 aaKnown RBP5.5□□□□□ -1.53
TDP1-207ENST00000553617 ZSWIM2Q8NEG5 633 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 EDARADDQ8WWZ3 215 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 KCNK4Q9NYG8 393 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 TJP2Q9UDY2 1190 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 KLHL3Q9UH77 587 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 CSADQ9Y600 493 aa5.5□□□□□ -1.53
TDP1-207ENST00000553617 SHISA8B8ZZ34 492 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 FANCGO15287 622 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 ADAMTS2O95450 1211 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 SLFN14P0C7P3 912 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 POLR2BP30876 1174 aaKnown RBP5.49□□□□□ -1.53
TDP1-207ENST00000553617 CD68P34810 354 aaPredicted RBP5.49□□□□□ -1.53
TDP1-207ENST00000553617 ZNF143P52747 638 aaPredicted RBP5.49□□□□□ -1.53
TDP1-207ENST00000553617 SLC7A5Q01650 507 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 ID3Q02535 119 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 TAF7LQ5H9L4 462 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 ZC3H12BQ5HYM0 836 aaKnown RBP5.49□□□□□ -1.53
TDP1-207ENST00000553617 KRT26Q7Z3Y9 468 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 ZBTB38Q8NAP3 1195 aaPredicted RBP5.49□□□□□ -1.53
TDP1-207ENST00000553617 SGSM3Q96HU1 749 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 TMEM87BQ96K49 555 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 BTBD6Q96KE9 485 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 METTL14Q9HCE5 456 aaKnown RBP5.49□□□□□ -1.53
TDP1-207ENST00000553617 LRRC4BQ9NT99 713 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 CRIM1Q9NZV1 1036 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 PLAAQ9Y263 795 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 CD2APQ9Y5K6 639 aa5.49□□□□□ -1.53
TDP1-207ENST00000553617 RGS13O14921 159 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 OIP5O43482 229 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 SLURP2P0DP57 97 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 RAG1P15918 1043 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 PMS1P54277 932 aaKnown RBP5.48□□□□□ -1.53
TDP1-207ENST00000553617 ETF1P62495 437 aaKnown RBP5.48□□□□□ -1.53
TDP1-207ENST00000553617 EXOSC6Q5RKV6 272 aaKnown RBP5.48□□□□□ -1.53
TDP1-207ENST00000553617 PPFIBP1Q86W92 1011 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 DMRTC2Q8IXT2 367 aaPredicted RBP5.48□□□□□ -1.53
TDP1-207ENST00000553617 TMEM192Q8IY95 271 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 LRRC47Q8N1G4 583 aaKnown RBP5.48□□□□□ -1.53
TDP1-207ENST00000553617 DTWD1Q8N5C7 304 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 GALNT6Q8NCL4 622 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 FAM13CQ8NE31 585 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 WHAMMQ8TF30 809 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 UBASH3BQ8TF42 649 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 STAG1Q8WVM7 1258 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 KISS1RQ969F8 398 aaPredicted RBP5.48□□□□□ -1.53
TDP1-207ENST00000553617 SLC26A8Q96RN1 970 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 TMPRSS13Q9BYE2 586 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 FBRSQ9HAH7 460 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 SUSD2Q9UGT4 822 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 PPP1R9AQ9ULJ8 1098 aa5.48□□□□□ -1.53
TDP1-207ENST00000553617 IQCA1LA6NCM1 817 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 FAM86C2PA6NEL3 165 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 MARCH6O60337 910 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 UBOX5O94941 541 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 ARHGEF15O94989 841 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 HOXB4P17483 251 aaPredicted RBP5.47□□□□□ -1.53
TDP1-207ENST00000553617 CAP2P40123 477 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 YARSP54577 528 aaKnown RBP5.47□□□□□ -1.53
TDP1-207ENST00000553617 BBS9Q3SYG4 887 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 GNPTABQ3T906 1256 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 TM4SF20Q53R12 229 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 SLC6A19Q695T7 634 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 RNF214Q8ND24 703 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 DISC1Q9NRI5 854 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 KLHL42Q9P2K6 505 aa5.47□□□□□ -1.53
TDP1-207ENST00000553617 SUCOQ9UBS9 1254 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms