RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 AGTPBP1Q9UPW5 1226 aa22.1■■□□□ 1.13
SHMT2-206ENST00000553529 GH2P01242 217 aa22.09■■□□□ 1.13
SHMT2-206ENST00000553529 OSBPP22059 807 aa22.09■■□□□ 1.13
SHMT2-206ENST00000553529 SHMT1P34896 483 aa22.09■■□□□ 1.13
SHMT2-206ENST00000553529 FASTKD5Q7L8L6 764 aaKnown RBP22.09■■□□□ 1.13
SHMT2-206ENST00000553529 DYNLL2Q96FJ2 89 aa22.09■■□□□ 1.13
SHMT2-206ENST00000553529 GABRQQ9UN88 632 aa22.09■■□□□ 1.13
SHMT2-206ENST00000553529 HLA-DOAP06340 250 aa22.08■■□□□ 1.13
SHMT2-206ENST00000553529 ZYXQ15942 572 aaKnown RBP22.08■■□□□ 1.13
SHMT2-206ENST00000553529 FOXP4Q8IVH2 680 aaPredicted RBP22.08■■□□□ 1.13
SHMT2-206ENST00000553529 ANKRD13CQ8N6S4 541 aa22.08■■□□□ 1.13
SHMT2-206ENST00000553529 TRIM34Q9BYJ4 488 aa22.08■■□□□ 1.13
SHMT2-206ENST00000553529 PUS7LQ9H0K6 701 aaKnown RBP22.08■■□□□ 1.13
SHMT2-206ENST00000553529 DCP1AQ9NPI6 582 aaPredicted RBP22.08■■□□□ 1.13
SHMT2-206ENST00000553529 CLEC10AQ8IUN9 316 aa22.07■■□□□ 1.12
SHMT2-206ENST00000553529 ARMC5Q96C12 935 aa22.07■■□□□ 1.12
SHMT2-206ENST00000553529 ECHDC1Q9NTX5 307 aa22.07■■□□□ 1.12
SHMT2-206ENST00000553529 MCM9Q9NXL9 1143 aa22.07■■□□□ 1.12
SHMT2-206ENST00000553529 FMNL1O95466 1100 aaPredicted RBP22.06■■□□□ 1.12
SHMT2-206ENST00000553529 EN2P19622 333 aaPredicted RBP22.06■■□□□ 1.12
SHMT2-206ENST00000553529 GUCY1A2P33402 732 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 PRKCZQ05513 592 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 TATDN1Q6P1N9 297 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 POTEEQ6S8J3 1075 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 ACER1Q8TDN7 264 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 ZNF333Q96JL9 665 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 SERPINB13Q9UIV8 391 aa22.06■■□□□ 1.12
SHMT2-206ENST00000553529 POLR3DP05423 398 aaPredicted RBP22.05■■□□□ 1.12
SHMT2-206ENST00000553529 SMCR8Q8TEV9 937 aaPredicted RBP22.05■■□□□ 1.12
SHMT2-206ENST00000553529 CRNKL1Q9BZJ0 848 aaKnown RBP22.05■■□□□ 1.12
SHMT2-206ENST00000553529 ASCC2Q9H1I8 757 aaPredicted RBP22.05■■□□□ 1.12
SHMT2-206ENST00000553529 EMILIN3Q9NT22 766 aa22.05■■□□□ 1.12
SHMT2-206ENST00000553529 ASNSP08243 561 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 GABPAQ06546 454 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 KIF22Q14807 665 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 MTFR1Q15390 333 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 SLC9C1Q4G0N8 1177 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 SH3D19Q5HYK7 790 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 PROCA1Q8NCQ7 364 aaPredicted RBP22.04■■□□□ 1.12
SHMT2-206ENST00000553529 WDR18Q9BV38 432 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 SRRDQ9UH36 339 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 RBBP6Q7Z6E9 1792 aaKnown RBP22.04■■□□□ 1.12
SHMT2-206ENST00000553529 MYPNQ86TC9 1320 aa22.04■■□□□ 1.12
SHMT2-206ENST00000553529 IGSF3O75054 1194 aa22.03■■□□□ 1.12
SHMT2-206ENST00000553529 BACE1P56817 501 aa22.03■■□□□ 1.12
SHMT2-206ENST00000553529 RAB3GAP1Q15042 981 aa22.03■■□□□ 1.12
SHMT2-206ENST00000553529 EHD4Q9H223 541 aa22.03■■□□□ 1.12
SHMT2-206ENST00000553529 SLC45A1Q9Y2W3 748 aa22.03■■□□□ 1.12
SHMT2-206ENST00000553529 SEPT2Q15019 361 aa22.02■■□□□ 1.12
SHMT2-206ENST00000553529 CERKLQ49MI3 558 aaPredicted RBP22.02■■□□□ 1.12
SHMT2-206ENST00000553529 STK11IPQ8N1F8 1099 aa22.02■■□□□ 1.12
SHMT2-206ENST00000553529 PI4K2BQ8TCG2 481 aa22.02■■□□□ 1.12
SHMT2-206ENST00000553529 P2RX7Q99572 595 aaKnown RBP22.02■■□□□ 1.12
SHMT2-206ENST00000553529 AS3MTQ9HBK9 375 aa22.02■■□□□ 1.12
SHMT2-206ENST00000553529 TXNRD2Q9NNW7 524 aa22.02■■□□□ 1.12
SHMT2-206ENST00000553529 M0R2C6 588 aa22.01■■□□□ 1.11
SHMT2-206ENST00000553529 ABCB5Q2M3G0 1257 aa22.01■■□□□ 1.11
SHMT2-206ENST00000553529 TTC6Q86TZ1 520 aa22.01■■□□□ 1.11
SHMT2-206ENST00000553529 OSBP2Q969R2 916 aa22.01■■□□□ 1.11
SHMT2-206ENST00000553529 SEC62Q99442 399 aaKnown RBP22.01■■□□□ 1.11
SHMT2-206ENST00000553529 UBE3CQ15386 1083 aa22■■□□□ 1.11
SHMT2-206ENST00000553529 KIAA1755Q5JYT7 1200 aa22■■□□□ 1.11
SHMT2-206ENST00000553529 SLC4A4Q9Y6R1 1079 aa22■■□□□ 1.11
SHMT2-206ENST00000553529 PLXNB2O15031 1838 aa22■■□□□ 1.11
SHMT2-206ENST00000553529 DOCK3Q8IZD9 2030 aa22■■□□□ 1.11
SHMT2-206ENST00000553529 MKI67P46013 3256 aaKnown RBP22■■□□□ 1.11
SHMT2-206ENST00000553529 A0A1W2PRG0 241 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 USP17L10C9JJH3 530 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 AKR1B1P15121 316 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 ELNP15502 786 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 FCGRTP55899 365 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 CERS3Q8IU89 383 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 EXOC6Q8TAG9 804 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.99■■□□□ 1.111e-6■■□□□ 11.9
SHMT2-206ENST00000553529 SALL3Q9BXA9 1300 aa21.99■■□□□ 1.11
SHMT2-206ENST00000553529 MYH8P13535 1937 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 USP17L12C9JPN9 530 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 USP17L21D6R901 530 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 MPHOSPH10O00566 681 aaKnown RBP21.98■■□□□ 1.11
SHMT2-206ENST00000553529 FLT3LGP49771 235 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 KBTBD3Q8NAB2 608 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 RAET1EQ8TD07 263 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 TMOD4Q9NZQ9 345 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 TAOK2Q9UL54 1235 aa21.98■■□□□ 1.11
SHMT2-206ENST00000553529 TNPO2O14787 897 aaKnown RBP21.97■■□□□ 1.11
SHMT2-206ENST00000553529 Q3C1V9 767 aa21.97■■□□□ 1.11
SHMT2-206ENST00000553529 CTR9Q6PD62 1173 aa21.97■■□□□ 1.11
SHMT2-206ENST00000553529 FEZ1Q99689 392 aa21.97■■□□□ 1.11
SHMT2-206ENST00000553529 EPB41L4AQ9HCS5 686 aaPredicted RBP21.97■■□□□ 1.11
SHMT2-206ENST00000553529 IRX3P78415 501 aaPredicted RBP21.96■■□□□ 1.11
SHMT2-206ENST00000553529 FAM110CQ1W6H9 321 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 ANKRD45Q5TZF3 282 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 C12orf60Q5U649 245 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 SIAH1Q8IUQ4 282 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 SHISA4Q96DD7 197 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 STRBPQ96SI9 672 aaKnown RBP21.96■■□□□ 1.11
SHMT2-206ENST00000553529 TBC1D2Q9BYX2 928 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 PNMA3Q9UL41 463 aa21.96■■□□□ 1.11
SHMT2-206ENST00000553529 IGHDP01880 384 aa21.95■■□□□ 1.1
SHMT2-206ENST00000553529 GRK4P32298 578 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms