RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 CPS1P31327 1500 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 NEXMIFQ5QGS0 1516 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-220ENST00000553491 TIAF1O95411 115 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 VAMP1P23763 118 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 FGD1P98174 961 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
ATXN3-220ENST00000553491 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-220ENST00000553491 SMG8Q8ND04 991 aaKnown RBP6.66□□□□□ -1.34
ATXN3-220ENST00000553491 MYRFLQ96LU7 910 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
ATXN3-220ENST00000553491 RGPD8O14715 1765 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-220ENST00000553491 GADD45BO75293 160 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-220ENST00000553491 ECEL1O95672 775 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 ATF3P18847 181 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 FSTP19883 344 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 DAB2P98082 770 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-220ENST00000553491 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.34
ATXN3-220ENST00000553491 TMC4Q7Z404 712 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 FBF1Q8TES7 1133 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
ATXN3-220ENST00000553491 USP26Q9BXU7 913 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
ATXN3-220ENST00000553491 ANKRD30BQ9BXX2 1392 aa6.65□□□□□ -1.35
ATXN3-220ENST00000553491 DHX15O43143 795 aaKnown RBP6.64□□□□□ -1.35
ATXN3-220ENST00000553491 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATXN3-220ENST00000553491 RPS26P11Q5JNZ5 115 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-220ENST00000553491 SLC51AQ86UW1 340 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 FAM20CQ8IXL6 584 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 BCO2Q9BYV7 579 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 TRAK1Q9UPV9 953 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 TMEM94Q12767 1356 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 LRRC7Q96NW7 1537 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 ALKQ9UM73 1620 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 NRXN3Q9Y4C0 1643 aa6.64□□□□□ -1.35
ATXN3-220ENST00000553491 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-220ENST00000553491 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-220ENST00000553491 RECKO95980 971 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 METP08581 1390 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 MAOBP27338 520 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 GNA15P30679 374 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 MSH6P52701 1360 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 PSMD2Q13200 908 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATXN3-220ENST00000553491 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 WAPLQ7Z5K2 1190 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 POGKQ9P215 609 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 STOML1Q9UBI4 398 aa6.63□□□□□ -1.35
ATXN3-220ENST00000553491 DIP2AQ14689 1571 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 ADAMTS13Q76LX8 1427 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 HMX2A2RU54 273 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 BMP3P12645 472 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 DRD2P14416 443 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 POU4F3Q15319 338 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 CLEC10AQ8IUN9 316 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 FAM83CQ9BQN1 747 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 RNF112Q9ULX5 631 aa6.62□□□□□ -1.35
ATXN3-220ENST00000553491 SETD1AO15047 1707 aaKnown RBP6.62□□□□□ -1.35
ATXN3-220ENST00000553491 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 PTPRUQ92729 1446 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
ATXN3-220ENST00000553491 SORBS3O60504 671 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 CYP11A1P05108 521 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 HSPA1LP34931 641 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 FCGRTP55899 365 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 C2CD4AQ8NCU7 369 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-220ENST00000553491 C3orf58Q8NDZ4 430 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 OSBPL7Q9BZF2 842 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 BCL11AQ9H165 835 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 C19orf44Q9H6X5 657 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 C14orf93Q9H972 538 aaKnown RBP6.61□□□□□ -1.35
ATXN3-220ENST00000553491 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 NLRP2Q9NX02 1062 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 AK5Q9Y6K8 562 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 PHLPP1O60346 1717 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 SETBP1Q9Y6X0 1596 aa6.61□□□□□ -1.35
ATXN3-220ENST00000553491 SART1O43290 800 aaKnown RBP6.6□□□□□ -1.35
ATXN3-220ENST00000553491 SOX4Q06945 474 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-220ENST00000553491 NFIAQ12857 509 aa6.6□□□□□ -1.35
ATXN3-220ENST00000553491 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
ATXN3-220ENST00000553491 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
ATXN3-220ENST00000553491 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-220ENST00000553491 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
ATXN3-220ENST00000553491 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms